Gene Sked_25360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25360 
Symbol 
ID8634170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2818071 
End bp2819090 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content71% 
IMG OID 
Productpredicted NADP-dependent oxidoreductase 
Protein accessionYP_003315274 
Protein GI269795819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.50036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.987423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC CCGCCACCAG CACCCAGATC CAGCTCGTCT CCCGGCCCAC CGGCTGGCCG 
ACGGCCGAGA ACTTCCGCAC CGTCACCGTC GAGCTCCCCG GGCTCGCGGC CGGCGAGGTC
CGCATCGAGA ACGAGTTCAT GTCGGTCGAC CCGTACATGC GGGGCCGCAT GAACGACGTG
AAGTCCTACA CGCCGCCCTT CGCGCTCGAC GAGACCATGA CCGGCGGGGC CGTCGGCCGG
GTCGTCGAGT CCACCTCGGA CGACGTCCCC GTGGGCTCCG TCGTGGTGCA CCAGCTCGGG
TGGCGCGACG TCGCCCAGGG TCCGGCCGCC GGGGTGCGCG TCGTCCCCGA GGTCGACGGC
ATCCCCAGCT CCGCCTACCT CAGCGTGCTC GGCATGACCG CGCTCACCGC CTACGTCGGC
CTCCTCGAGA TCGCCCACCT GCGCGAGGGC GACACCGTGT TCGTCTCCGG CGCCGCCGGT
GCGGTCGGCA GCATGGTCGG CCAGATCGCC CGCCTCAAGG GCGCGGCGCG CGTCGTCGGG
TCTGCCGGGT CGGCGGAGAA GGTCGCCCTC CTCACCGAGC GCTACGGCTT CGACGCCGCC
TTCAACTACA AGGACGGCGA CGTCGCGGGG CAGCTCGCGC AGGCCGCGCC CGACGGCATC
GACGTGTACT TCGACAACGT CGGCGGGGAG CACCTCGAGG CCGCGCTCGG GGCCTTCAAC
GACCAGGGGC GCGCGGCGCT GTGCGGCGCG ATCTCGCAGT ACAACACCGA GGGCGAGGCG
ACCGGTCCGC GCAACATGGC GAACATCGTC ACCCGCGGTC TGACCCTCCA GGGCTTCACC
GTCGGCGGCT ACACGCAGCA CTTCCCGTCC TTCATGGCGG ACATGACCGC CTGGGTCACC
GCAGGCGACG TCGTCTTCGA CGAGACGGTC GTCGAGGGCC TCGACCACGC GGTCGACGCG
TTCCTCGGCA TGATGCGCGG CGAGAACGTG GGCAAGATGG TCGTGAAGAC CGCACGCTGA
 
Protein sequence
MTQPATSTQI QLVSRPTGWP TAENFRTVTV ELPGLAAGEV RIENEFMSVD PYMRGRMNDV 
KSYTPPFALD ETMTGGAVGR VVESTSDDVP VGSVVVHQLG WRDVAQGPAA GVRVVPEVDG
IPSSAYLSVL GMTALTAYVG LLEIAHLREG DTVFVSGAAG AVGSMVGQIA RLKGAARVVG
SAGSAEKVAL LTERYGFDAA FNYKDGDVAG QLAQAAPDGI DVYFDNVGGE HLEAALGAFN
DQGRAALCGA ISQYNTEGEA TGPRNMANIV TRGLTLQGFT VGGYTQHFPS FMADMTAWVT
AGDVVFDETV VEGLDHAVDA FLGMMRGENV GKMVVKTAR