Gene Sked_24140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24140 
Symbol 
ID8634049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2691530 
End bp2692891 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content72% 
IMG OID 
Productaminotransferase 
Protein accessionYP_003315162 
Protein GI269795707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCGC CCTCCCCGGC CGCCCCGTCA CAGGGCTCGG CTCGTCAGAC CGGTATCTCG 
TCTCCCAGCA CAGCCCTCGA GCTCGACCGT GCCCACGTCT TCCACTCGTG GTCCGCGCAG
GGGTCCCTGC AGCCCATGAC CATCGAGGGC GGGCTCGGGT GCGAGGTGTG GGACGACACG
GGACGCCGGT ACCTCGACTT CTCGTCGCAG CTCGTCAACG TCAACATCGG GCACCAGCAC
CCCCGGGTCG TCGAGGCCAT CGCGGAGCAG GCGCACCTGC TGACGACCGT CGCCCCCGGC
CACGCCAACC TCACGCGCGG CCGCGCCGCA CGGCTCATCA CCGAGCGCGC CCCGGACGGG
CTGGACAAGG TGTTCTTCAC CAACGGCGGT GCCGACGCCA ACGAGAACGC GATGCGCATG
GCCCGCCTGC ACACCGGGCG CTCCAAGGTC CTCTCGGCGT ACCGCTCGTA CCACGGCAAC
ACCGGCTCGG CCGTGGTCGC CACGGGCGAC TGGCGACGCA TCCCCAACGA GCTCGCGCAC
GGGCACGTGC ACTTCTTCAC CCCGTACCTG TTCCGCTCCG ACTTCTGGGC CTCGACCCCC
GAGGAGGAGT GCGCCCGCGC TCTCGAGCAC CTGGCCCGCG TCGTGGAGTG CGAGGGGCCG
TCGTCGATCG CCGCGATCCT CCTCGAGACG GTGCCGGGCA CCGCAGGGGT CCTCACCCCA
CCGCCCGGCT ACCTCGCCGG GGTGCGCGAG ATCGCCGACA GGCACGGCAT CCTGCTGATC
CTCGACGAGG TCATGGCCGG CTTCGGCCGG ACGGGGCACT GGTTCGCCTT CGACGACCAC
GCCGTCCGCC CCGACCTCGT CACGTTCGCC AAGGGGGTCA ACTCCGGGTA CGTCCCCGCT
GGCGGGGTGA TCATCGACGC CCTCGTCGCC GCGACCTTCG ACGACCGGGT GTTCCCCGGC
GGCCTCACCT ACTCCGGTCA CCCCCTCGCC ATGGCCGCGA TCGTCGGGAC CCTCGAGGCG
ATGGCCGACG AGGGCATCGT CGAGAACGCC CGCACCGTCG GCTCCGAGCA CATCGGCCCG
GGCCTGCGGG CGCTCGCGGA CGCGCACCCG ATGATCGGTG AGGTCCGGGG GAGCGGTGTC
TTCTGGGCGC TCGAGCTCGT CGCCGACCCG GCGACGCGCC AGCCCGTCGC CCCGGCCGTC
GTCGGTGCCG TGAAGAAGGG CTGCCTCGAC CGCGGGCTGC TGCCCTTCGT CGCCGACAAC
CGCCTGCACG TGGTGCCGCC GTGCGTCGTC ACACCCGCCG AGGTCGCGCG AGCGCTCGCG
GTGTACGACG AGGTGCTCAC CGAGGTCGAG GCGGGACTCT GA
 
Protein sequence
MPPPSPAAPS QGSARQTGIS SPSTALELDR AHVFHSWSAQ GSLQPMTIEG GLGCEVWDDT 
GRRYLDFSSQ LVNVNIGHQH PRVVEAIAEQ AHLLTTVAPG HANLTRGRAA RLITERAPDG
LDKVFFTNGG ADANENAMRM ARLHTGRSKV LSAYRSYHGN TGSAVVATGD WRRIPNELAH
GHVHFFTPYL FRSDFWASTP EEECARALEH LARVVECEGP SSIAAILLET VPGTAGVLTP
PPGYLAGVRE IADRHGILLI LDEVMAGFGR TGHWFAFDDH AVRPDLVTFA KGVNSGYVPA
GGVIIDALVA ATFDDRVFPG GLTYSGHPLA MAAIVGTLEA MADEGIVENA RTVGSEHIGP
GLRALADAHP MIGEVRGSGV FWALELVADP ATRQPVAPAV VGAVKKGCLD RGLLPFVADN
RLHVVPPCVV TPAEVARALA VYDEVLTEVE AGL