Gene Sked_23900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23900 
Symbol 
ID8634025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2658261 
End bp2659256 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content72% 
IMG OID 
Productdihydroxyacetone kinase, DhaK subunit 
Protein accessionYP_003315138 
Protein GI269795683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0662069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.453933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAGC TCATCAACGA CCCGGAGAAC GTCGTCGCGG AATCGGTCGA AGGGTTCGGG 
TGGGCCCACG ACGACATCGT CGAGGTCCGC ACCGACCCCC TGCTCGTCCT CCGCAAGGGT
GGCGCCGTCG AGGGCCAGGT CGGCCTGGTC TCGGGCGGGG GAGCGGGCCA CGAGCCCCTG
CACGCCGGCT TCGTCGGCGA GGGGATGCTC ACGGCGGCCG TCCCCGGCGC CGTGTTCACC
TCCCCGACCC CTGACCAGAT CCAGCCCGCC CTGACCGCCG CAGACAGCGG TCGGGGTGTG
CTCGCGATCG TCAAGAACTA CACGGGCGAC GTCCTCAACT TCGAGACCGC CGTCGAGCTC
GCCGAGGACG AGGGGACGAC GGTGCGGACC GTCGTGGTGA CCGACGACGT CGCGGTCGAG
GACTCCCTGT ACACGGCGGG TCGCCGAGGG GTCGCCGGCA CGCTCGTCGT CGAGAAGATC
GCCGGGGCCA GCGCGGCCCG TGGCGACGAC CTCGACACCG TGACGGCCGT CGCGGCGCGC
GTCTGCTCGC AGGTCCGGTC GATGGGTGTC GCGCTCGCCG CCCCCACCGT CCCGCACGTC
GGCCGCCCGA GCTTCGACCT CGCGGACGAC GAGGTCGAGA TCGGCATCGG CATCCACGGG
GAGCCCGGGC GGCACCGCAT CCCCGCCGCC CCCGCCGACG AGATCGCGCA GATGCTCCTC
GAGCCCGTGG TCGACGACCT CGACCTGCAG CCGGGGGAGC CCGTGTTGCT GTTCGTTAAC
GGAATGGGCG GCACCCCGCA GTCCGAGCTC TACGTGGTCT ATCGTCAGGC TCGCCGGCTC
CTCGAGGCAC GAGGCGTCAC GGTCGCACGG TCTCTCGTCG GGAGCTACGT CACGTCCCTC
GAGATGCAGG GCGCGTCGGT GACGGTGCTC CGGCTCGACG ACGAGCTCAC CCACCTGTGG
GACGCCCCTG TGCGGACCGC AGCGCTGCAC TGGTGA
 
Protein sequence
MKKLINDPEN VVAESVEGFG WAHDDIVEVR TDPLLVLRKG GAVEGQVGLV SGGGAGHEPL 
HAGFVGEGML TAAVPGAVFT SPTPDQIQPA LTAADSGRGV LAIVKNYTGD VLNFETAVEL
AEDEGTTVRT VVVTDDVAVE DSLYTAGRRG VAGTLVVEKI AGASAARGDD LDTVTAVAAR
VCSQVRSMGV ALAAPTVPHV GRPSFDLADD EVEIGIGIHG EPGRHRIPAA PADEIAQMLL
EPVVDDLDLQ PGEPVLLFVN GMGGTPQSEL YVVYRQARRL LEARGVTVAR SLVGSYVTSL
EMQGASVTVL RLDDELTHLW DAPVRTAALH W