| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23870 |
|---|
| Symbol | |
|---|
| ID | 8634022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2655951 |
|---|
| End bp | 2656592 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003315135 |
|---|
| Protein GI | 269795680 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0323672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCACTC CTCCTCCCGA CCCCGGTCCC GGACTGCGCG AGCGCAAGAA GGCGGCGCGC
CGCGAGGCGC TCGTCTCCGC GTCTCACGAC CTCGTGTCCC GGCTCGGCCT CGACGCCGTC
ACCGTCGAGA TGATCTGCGA CGAGGTCGGG GTCTCGCCCC GCACCTTCTT CAACTACTTC
GCCTCGAAGG TCGACGCCGT CCTGGGGATC CAGGAGACGC CGCTCTCCGG CGAGACCGCC
GAGGTCTTCG CCGGGGGCGG CCCGACGGGC GACCTCCTCG ACGACTGCGC GGCCGTCGTC
GGCTCCATGC TCGACAGCGC GCCGATCGAC CTCGACCGCA TGGCCCTGGT CATGGAGCTG
TCGCAGCGCG AGCCGGCGCT GCTCGTCCGC CAGCTCGCCT GGTTCGAGGA GCGCACCGAA
GAGCTCGCAG GTCTCGCCGC CCGCAGGACC GGCGCCGAGA CCCCGGGCGC CACCGAGAAG
ATGATCAGCT CGTTGGTCCT CCTCGTGGTG CGCTCCACCC TCGCCCGGTG GGAGATCGCC
GGCAGTGCCG GCCTCCCGTC CAGCCACCTC CCTGACGTCA CCGCCGAGCT CCGGACGCTG
GTCGCGCCCG CGCCCGACGC GCACACCTCG TCCCCCGCCT AG
|
|---|
| Protein sequence | MPTPPPDPGP GLRERKKAAR REALVSASHD LVSRLGLDAV TVEMICDEVG VSPRTFFNYF
ASKVDAVLGI QETPLSGETA EVFAGGGPTG DLLDDCAAVV GSMLDSAPID LDRMALVMEL
SQREPALLVR QLAWFEERTE ELAGLAARRT GAETPGATEK MISSLVLLVV RSTLARWEIA
GSAGLPSSHL PDVTAELRTL VAPAPDAHTS SPA
|
|---|
| |