Gene Sked_23780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23780 
Symbol 
ID8634013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2643811 
End bp2645733 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content76% 
IMG OID 
ProductUTP:GlnB (protein PII) uridylyltransferase 
Protein accessionYP_003315126 
Protein GI269795671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.259899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC AGCCCGGCCC GCAGCGCTCA CCTGAGGTCC CGCACCCCGC CGGGGTGCGG 
GACCTCAGGT CCGAGATGAT CGACCTCGCG GCCTCCCTCA GCGGGCCGAC CGGCCCGGGA
GCGGGACCCG CCCGTGGCAC CGCAGCCACC GAGACGATGA CCGCGGCGCT CCGCCCGGTC
CCCGCCGAGC AGGGCCGGGG CCGCAGGGCG GCGCTGGTCG ACCTCGCCAG CACCCGGCTC
CGCGAGCTCT GGGACACGGC CACCGTCGGG ACCGACACCG CAGGGATCGC CCTCGCCGCC
GTCGGGAGCC TCGGACGCGG CGACCTCGGT CCGGTCTCGG ACCTCGACCT CGTGCTCGTG
CACGACGGGC GCTCCCACTC CGCCGAGGCC GTCCAGCGCC TCGCCGAAGG TCTCTGGTAC
CCGATCTGGG ACGCGAGCCT CGAGCTCGAC CACTCGGTGC GCACGCTGGC CCAGTGCCGG
CAGATCGCCT CGAAGGACCT CCCCGCCGCG ATGGGCATGC TCGACGTCCG GCCGATCGCC
GGGGACACCG TCGTCGCCCA CCGCGCGTCG TCGGCCGTCC TCGAGGACTG GCGGGCGGCA
GCCAGACGAC GCCTGCCCGA GCTGGTCGCG TCGACGAAGG CCCGTGCCAG CAGGCACGGT
GAGCTGGCCT ACCTCATCGA GCCAGACCTC AAGGAGGCGC GCGGCGGCAT CCGGGACGCG
GTCATCCTCA CCGCCCTCGC CGCGACGTGG CTCACCGACC GTCCGCACGG CGCCGTCGAC
CGTGCGTACT CGCACCTGCT CGACGCCCGC GACGCGCTCC AGCTCACCAC CCGGCGGCAC
ACGAACCGGC TGGGGCTGGC CGACCTCGAC GAGGTCGCCG TGCTCTGCGG GTACGCCGAC
CCCGACGACT TCCTCGCGAG CCTCGCCGAC GCCGGGCGCG AGATCTCCTA CGGCCTCGAC
ACGACACTCC GCCGCGCGCG CCAGGCGCTG CAGCGGCCGC TCGTCACGCG GCCCTTCCTC
GTCCGAGGTC GCAGGGCAGC ACCGCGCCTG CGGTCCGTCG GCGACGGGCT CGTCGAGCAC
GACGGCGAGC TCGTGCTCGC CGTCGACGCA GTGCCGACCG CCGACCCGCT GCTCGCGCTG
CGGGCCGCCG CGACGGCCGC CCGGACCGGG CTGGCGCTCT CGCCGGTGTC GGCGTCGAGC
CTCGCCCAGT GCCCTCCGCT GCCACGGCCC TGGCCTCGGC AGGCCCGCGC GTCGCTGCTC
ACGCTGCTCG GCTCGGGTGC CGCCCAGGTG CCCGTGTGGG AGGCGCTCGA CCGTGCCGGT
GTCGTCACGT CGTGGATCCC CGAGTGGGTC GGCGTGCGCA ACCGTCCCCA GCGGGCGGCG
GTCCACCGGC ACACCGTCGA CCGGCACCTC ATCGAGGTCG TCGCGCGTGC CCGTGGGTGG
CGCAAGAACG TCGCCCTGCC CGACGTGCTG CTGCTCTCGG CGCTGCTCCA CGACATCGGC
AAGCGGGCGG GTGGCGAGGA CCACTCGACG GCCGGCGCCC GCCTCGTGCC CGACGTCGTC
GGGCGCATGG GCTTCGACGA GGGCGTGGTG TCCGACGTCC AGCGCATGGT CGCCCAGCAC
CTCACGCTCT CCCGGCTCGC CGTGAGCAGC GACCCCGACG ACCCGGGCAC CGTGACCGAG
CTCCTCGAGG CCGTCGACCA CCGCGGCGAC CTCCTCGAGG TGCTCCGCGC GCTGACCGAG
GCGGACTCCT CCTCGCTCGG CCCCAACGGC TGGACCACCT GGCGTGCGCG GCTCGTGGAC
GACCTCTACC GACGCGCCGC GCAGGCGCTC GGCGTCCCGG ACGACGGTGC CCAGACCGGT
GACCGCCCGC CCGCCGCGGC CGTCGAGGGT GCAGCAGGGG GCGACGATCA CCCGGTAGTC
TGA
 
Protein sequence
MSNQPGPQRS PEVPHPAGVR DLRSEMIDLA ASLSGPTGPG AGPARGTAAT ETMTAALRPV 
PAEQGRGRRA ALVDLASTRL RELWDTATVG TDTAGIALAA VGSLGRGDLG PVSDLDLVLV
HDGRSHSAEA VQRLAEGLWY PIWDASLELD HSVRTLAQCR QIASKDLPAA MGMLDVRPIA
GDTVVAHRAS SAVLEDWRAA ARRRLPELVA STKARASRHG ELAYLIEPDL KEARGGIRDA
VILTALAATW LTDRPHGAVD RAYSHLLDAR DALQLTTRRH TNRLGLADLD EVAVLCGYAD
PDDFLASLAD AGREISYGLD TTLRRARQAL QRPLVTRPFL VRGRRAAPRL RSVGDGLVEH
DGELVLAVDA VPTADPLLAL RAAATAARTG LALSPVSASS LAQCPPLPRP WPRQARASLL
TLLGSGAAQV PVWEALDRAG VVTSWIPEWV GVRNRPQRAA VHRHTVDRHL IEVVARARGW
RKNVALPDVL LLSALLHDIG KRAGGEDHST AGARLVPDVV GRMGFDEGVV SDVQRMVAQH
LTLSRLAVSS DPDDPGTVTE LLEAVDHRGD LLEVLRALTE ADSSSLGPNG WTTWRARLVD
DLYRRAAQAL GVPDDGAQTG DRPPAAAVEG AAGGDDHPVV