Gene Sked_23410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23410 
Symbol 
ID8633976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2606642 
End bp2607343 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003315090 
Protein GI269795635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.166652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGGCG GGGGCGTGGG CGATGTCGTC GTCGAGACGA GCGGCCTCGA GGTGGGATAC 
GGCGACGTCC GGGTGTGCGC ACCTGTCGAC CTCGTCCTGC GCCGCGGGGA GAGCCTCGCG
GTGATCGGGG CCAACGGCAG CGGGAAGTCC ACCGTGCTGC GCACCGTCCT CGGCCTGCTG
CCCCCGCTCG GAGGACAGGT CGAGGTCCTC GGCCGGGAGG TCGACGAGCG CGACCGGCGG
TTCCGTGCTG CGGTCGCGGG GGTGCTCGAC GCCGACGCGT ACTTCCCCGG GCTCACCACG
CGCGAGCACC TCGTCCTCAC CGCCCGCGGC TTCGGCGTCG CCGAGGCGGG CCGTGTCGTG
GACGAGGTCC TCGAGGTCGT CGGCATCGCC CACCAGGGCG ACACGCTCCC CGACGCGCTG
TCCTCGGGGC AGCGACGTCG CCTGCTCCTC GCGTCAGGGT TCGTCCGCCC CCGTGAGCTC
CTCGTCCTCG ACGAGCCCGA GCAGCGGCTG GACGTGCGGA TGCGCCGGAC CCTCGCCCGG
CTGCTCCGGG ACGAGACCGC TCGCGGGGGC GCCGTCCTCT ACGCCACGCA CGACGAGACG
CTGCTGCGCG AGACCGGGAG CCCCGCCCTG CTCGTCGCCG AGGAGGAGTC GCGGGTGCTG
TCCTCGGCAG AGGCCTGCGA GCTCCTCGCA GCCGGGCTCT GA
 
Protein sequence
MHGGGVGDVV VETSGLEVGY GDVRVCAPVD LVLRRGESLA VIGANGSGKS TVLRTVLGLL 
PPLGGQVEVL GREVDERDRR FRAAVAGVLD ADAYFPGLTT REHLVLTARG FGVAEAGRVV
DEVLEVVGIA HQGDTLPDAL SSGQRRRLLL ASGFVRPREL LVLDEPEQRL DVRMRRTLAR
LLRDETARGG AVLYATHDET LLRETGSPAL LVAEEESRVL SSAEACELLA AGL