Gene Sked_23240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23240 
Symbol 
ID8633959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2588357 
End bp2588686 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content69% 
IMG OID 
ProductHelix-turn-helix protein 
Protein accessionYP_003315073 
Protein GI269795618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0729263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0373097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTAC TGCGCCGAGA GATCGGGGAC GTACTGCGAG ATGCTCGCCA GCTACAGGGA 
CGCACGCTCC GCGAGGTGTC CTCAGCAGCA CGGGTGTCGC TCGGGTACCT CAGCGAGGTC
GAGCGTGGCC AGAAGGAAGC GTCGTCTGAG CTCCTCGGCT CGATCTGCGA GGCCCTCGAC
ATCCCGCTCT CGTCGATCCT GCGAGAGGTG AGCGACCGCA TCGCGGTCGC CGAGGGTCTG
CTCATCCCGG ACACCGTCCC GGCGGACCTC GCCGCGATGG GCCGCGACGC CCTGGGCCGC
ACCGCGAAGG ACCTCCAGCC GATCGGCTGA
 
Protein sequence
MVVLRREIGD VLRDARQLQG RTLREVSSAA RVSLGYLSEV ERGQKEASSE LLGSICEALD 
IPLSSILREV SDRIAVAEGL LIPDTVPADL AAMGRDALGR TAKDLQPIG