| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23180 |
|---|
| Symbol | |
|---|
| ID | 8633953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2578670 |
|---|
| End bp | 2580136 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | conserved hypothetical protein YmdA/YtgF |
|---|
| Protein accession | YP_003315067 |
|---|
| Protein GI | 269795612 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.476125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.212245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGTG CAGAGCTCGG GACCCTGCTC GCGCTGCTCG TCACCTGCCT CGTCGCCCTG
CTCCTCGTCC AGACGGCCCG CCGCGAGGCG GCCGCCGTCC GGTCCCGTGC CGCAGCAGAC
GTCGACGAGC TCCGCAACGA CACCCGACGC CGTGACGACG AGTCGCGGGT CCGGCTCGAC
GAGGCCCGGG CCCTCGAGAA GGACCTCTCG TCCCGGCGCG CGCGCCTCGA AGAGGCCGAG
GAGCGTCTCC AGGCCCTCGC AGCCCAGGCG GTCGTCGACG CAGCAGGCGC CGCGGCGGAG
CGCGGACGGC TCCGCGACGA CCTGGTCCGT GAGCTCGAGG AGAGCTCCGG CCTGAGCCGC
GAGCAGGCCG TCGCACGGCT CTCCGAGGTG CTGCGTGCCG ACGCCGAGCA CGAGGCCAGC
GGCGCCGTAC GACGTGTCGA GGCGGCCGCC CGCCGGACCG CCGACCAGTC TGCCCGTCGG
ATCGTCGCGA CCGCGGTCCA GCGCCTCAGC GTGCCGACCA GCTCGGCTGT CGCGGTCACG
ATCGTGCCGC TCCCCACGGA CGACCTCCGT GGTCGGATCA TCGGCCGCGA GGGGCGCAAC
ATCCGGACCT TCGAGGCTGT CACGGGAGTC AACCTGCTGG TCGAGGACGA CTCGAGCACG
GTCCAGCTCT CGTCCTTCGA CGCCGAGCGC CGCGAGGTAG CCCAGGCGAC TCTCCAGGCG
CTCATCGACG ACGGGCGCAT CCACCCGCAG CGCATCGAGT CCGCCTACGC GCAGGCTCTC
GCCGACGCCC CCGCACGGAC CGCTGCCGCC GGCCACGACG CTGCGGAGCG AGCCGGCGTC
GCCCGGCTGC CGCACGAGCT CGTCCTCGCC GTCGGCGCGC TACGGCACCG CACCTCCTAC
GGGCAGAGCG TGCTCGAGCA CAGCGTGGAG ACGGCGCTCG TCGCAGCGAG CCTGGCGGCC
GAGGTCGGTG CTGACGTCGA GACGGCGCGG CGGGCCGCCT TCCTGCACGA CGTCGGCAAG
GGCGTCAGCG CCTCCGCCGG CGGGTCGCAC GCCGCCGCCG GTGCACGCCT GCTGAGCGCG
GCGGGCGAGA CGCACGCGGT CGTCAACGCC GTCGCCGCGC ACCACGACGA GGTCCCCGCC
GAGACGGTCG AGGCGGTGCT CGTCCAGGCC GCCGACGCCT GCTCCGCCGC CCGGCCGGGC
GCGCGACGCG ACGAGCTCGA CCGGTACGTC GAGCGCATGG AACGGCTCGA GGGCGTCGCC
GTGGCCCACC CCGGGGTCAC CCGTGCGCTC GCCCTCGCGA GCGGTCACGA GCTCCGGGTG
GTGGTCGAGC CCTCGGCGGT GACCGACGAC GACCTCCCGG GCCTCGCCCG AGATATCGCG
AAGGACATCG AGGCCGCGCT GAGCTACCCC GGCGAGATCT CGATCACCGT CGTGCGTGAG
CTGCGCGCAC AGGCGACCGC CGGCTGA
|
|---|
| Protein sequence | MTGAELGTLL ALLVTCLVAL LLVQTARREA AAVRSRAAAD VDELRNDTRR RDDESRVRLD
EARALEKDLS SRRARLEEAE ERLQALAAQA VVDAAGAAAE RGRLRDDLVR ELEESSGLSR
EQAVARLSEV LRADAEHEAS GAVRRVEAAA RRTADQSARR IVATAVQRLS VPTSSAVAVT
IVPLPTDDLR GRIIGREGRN IRTFEAVTGV NLLVEDDSST VQLSSFDAER REVAQATLQA
LIDDGRIHPQ RIESAYAQAL ADAPARTAAA GHDAAERAGV ARLPHELVLA VGALRHRTSY
GQSVLEHSVE TALVAASLAA EVGADVETAR RAAFLHDVGK GVSASAGGSH AAAGARLLSA
AGETHAVVNA VAAHHDEVPA ETVEAVLVQA ADACSAARPG ARRDELDRYV ERMERLEGVA
VAHPGVTRAL ALASGHELRV VVEPSAVTDD DLPGLARDIA KDIEAALSYP GEISITVVRE
LRAQATAG
|
|---|
| |