| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_22710 |
|---|
| Symbol | |
|---|
| ID | 8633906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2525888 |
|---|
| End bp | 2526571 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_003315020 |
|---|
| Protein GI | 269795565 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.52944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.101415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCCG AGAACGACAG CCCCGGACCG AACGACAGCA GCTCGACCTC CGGGTCGCCC
GGCCTGCGCG CCAGCACGGC GCCGGCCGGC CCCCGGACCG GGAGGGTGCT GGCGGGCATC
CTCGGCATCG CAGCCGTGGT GCTGCTCGTG GACCAGCTCA CCAAGCTCTG GGCCCAGTCG
GGGCTCGAGG AGGGAGCGGC CCCGCTGCCG CTCATCGGTG AGCTGATCCA GCTCCGCCTC
ATCTACAACC CGGGCGCGGC CCTCTCGATC GCCAGCGGCC AGACCTGGAT CCTCAGCCTC
CTCTCCGTCG GCGTCGTGGT GTTCGTGGTC GTCACGGCCC GCAAGATCCG GTCGACGGCC
TGGGCGGTCG CTCTCGGCCT CGTGCTCGGA GGGGCCCTCG GCAACCTCGG CGACCGGCTC
TTCCGGGAGC CCGGCTTCCT CGTGGGCCAC GTGGTCGACT TCATCGACTA CGGCCCGTTC
ATCGGCAACG TCGCGGACAT CGCGATCGTC GTCGCCGCCG TGATGATCGG CATCCTCGCG
ATCCGCGGGA TCGGACCCGA CGGTCTGCGC GGAGACGAGC AGGACGAGCC CGCCGAGGTC
GACAGCGCGT CGGGCACCGC GGAGGCAGCC AGCACGGACG AGACCGGCGG GACGACCACC
GGCACGGGCG AGGAGCAGCG ATGA
|
|---|
| Protein sequence | MIAENDSPGP NDSSSTSGSP GLRASTAPAG PRTGRVLAGI LGIAAVVLLV DQLTKLWAQS
GLEEGAAPLP LIGELIQLRL IYNPGAALSI ASGQTWILSL LSVGVVVFVV VTARKIRSTA
WAVALGLVLG GALGNLGDRL FREPGFLVGH VVDFIDYGPF IGNVADIAIV VAAVMIGILA
IRGIGPDGLR GDEQDEPAEV DSASGTAEAA STDETGGTTT GTGEEQR
|
|---|
| |