| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_22700 |
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| Symbol | |
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| ID | 8633905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2524956 |
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| End bp | 2525891 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_003315019 |
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| Protein GI | 269795564 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.17143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC GCACGCTCCC CGTCCCCGAC GGGCTCGCCG GCGAGCGGGT CGACGCGGCC
CTGGCCCGCA TGCTCGGGCT CTCCCGGACC GTCGCAGCCC AGATCGCGTC CGACGGCGGG
GTCCGCCTCG ACGGACGTGC CCTGGGCAAG TCCGACCGCC TCGCACCGGA CTCGTGGATC
GAGGTCGACG TGCCAGACCC GTCCGCACCT CGCGGGCCCG TCGTGGTGGC CGAGCCGGTC
CCCGGCATGA AGATCATGTA CGACGACGAC GACGTGGTGG TCATCGACAA GCCCGTCGGC
GTCGCGGCGC ACCCCTCCGT GGGGTGGACC GGCCCGACCG TGGTCGGTGC GCTGATCGCC
GCGGGGTACA CGATCGCGAC CTCGGGAGCT GCCGAGCGCC AGGGCATCGT CCACCGTCTC
GACGTGGGGA CCTCGGGCCT CATGGTCGTG GCCAAGAGCG AGCACGCGTA CTCGGTGATG
AAGCGCGCCT TCAAGGAGCG CACCGTCGAG AAGGTCTACC ACGCGCTCGT CCAGGGACAC
CCCGAGCCCA CCACGGGGAC CATCGACGCG CCGATCGGCC GCCACCCGAA CCACGACTAC
AAGTTCGGGG TGGTCGCCGA CGGCAAGCCC TCGGTGACGC ACTACGAGGT GCTCGAGATG
CTCTCCGCCG CCTCCCTCGT CGAGGTGCAC CTGGAGACCG GGCGCACCCA CCAGATCCGC
GTGCACTTCT CGGCGCTGCG CCACCCCTGC GTCGGTGACC TCACCTACGG TGCGGACCCG
CGCCTCGCGG AGAAGGTCTC GCTGACGCGC CAGTGGTTGC ACGCCAAGCG GCTCGGCTTC
GAGCACCCCT CGACAGGCGA GTGGGTCGAG GTGGTCAGCG AGTACCCCGA GGACCTCGCC
GCAGCCCTCG AGGTCGTCCG GGGGGAGTAC CGATGA
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| Protein sequence | MTTRTLPVPD GLAGERVDAA LARMLGLSRT VAAQIASDGG VRLDGRALGK SDRLAPDSWI
EVDVPDPSAP RGPVVVAEPV PGMKIMYDDD DVVVIDKPVG VAAHPSVGWT GPTVVGALIA
AGYTIATSGA AERQGIVHRL DVGTSGLMVV AKSEHAYSVM KRAFKERTVE KVYHALVQGH
PEPTTGTIDA PIGRHPNHDY KFGVVADGKP SVTHYEVLEM LSAASLVEVH LETGRTHQIR
VHFSALRHPC VGDLTYGADP RLAEKVSLTR QWLHAKRLGF EHPSTGEWVE VVSEYPEDLA
AALEVVRGEY R
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