| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_22650 |
|---|
| Symbol | |
|---|
| ID | 8633900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2518612 |
|---|
| End bp | 2519934 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_003315014 |
|---|
| Protein GI | 269795559 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.331856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.288834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAACA GACTCGACCT GCGAGGTCGT TCCCTCTCCG CCCGTGAGCT CGTCGAGGCG
CTGCCCCGGG CAGAGGTCCG TGTCGAGGAC GCCGCCGAGC GGGTCGCCCC CATCATCGCG
GCGGTGCGCC GCCGCGGGGC CGACGAGCTC CGCGACCTCG CCGAGCGCTT CGACGGTGTC
CGCCCGCACC ACCTGCGCGT CCCGGCCGAG GCCTTCGAGA GCGCGCTGGC CGGGCTCGAC
CCGCTGGTGC GCGAGGCGAT CGAAGAGACC ATCTCGCGCG TGCGCACCGT GCACCGCGCG
CAGCGTCCTC AGGACTTCGT GGTCGACCTC GCCGACGGCG CGCAGGTCCG CCAGCGCTGG
GTCCCCGTCG GCCGTGTGGG CCTCTACGTC CCCGGCGGCC TGGCCGTCTA CCCGTCGTCG
GTCGTGATGA ACGTCGTGGC GGCCCAGGAG GCCGGAGTGC CCTCGCTCGC CGTCGCGAGC
CCGCCCCAGA GCGAGAACGC GGGTCTCCCG CACCCGACGA TCCTCGCGGC GTGCGCGCTG
CTCGGCGTCG ACGAGGTCTA CGCCGTCGGA GGTGCCCAGG CCGTCGCGAT GTTCGCCTAC
GGGGCGCGTG GCACCGAGGA GCAGGACGGC GCGGTGCTCT GCGAGCCCGT GAACGTCGTC
ACCGGCCCGG GCAACGTGTA CGTCGCCGCC GCCAAGCGGC TCGTCCGCGG GGTCGTCGGC
ATCGACGCGG AGGCGGGCAC CACGGAGATC GCGATCCTCG CCGACGGCAC CGCGCACCCC
GACCACGTCG CGGCCGACCT CATCAGCCAG GCGGAGCACG ACCCCGCCGC CGCCTCGGTC
CTGGTGACCT CGTCGGTCGA GCTCGCCGGC GCCGTCGAGG CCCGCCTCAA AGACCGCGCC
GAGGGCACCC GCCACTCGGA CCGGGTGCTG CAGGCCCTCG CGGGTCCGCA GTCCGCGATC
GTCCTCGTCG ACTCGGTCGA GCAGGGGATC GAGGTCGTCG ACGCCTACGG GGCGGAGCAC
CTCGAGATCC AGACGGCCGA CGCCGCAGCC GTGGCCGAGC GCATCTCCAA CGCCGGGGCG
ATCTTCGTCG GCCCGTACTC GCCCGTCGCC CTCGGCGACT ACATGGCCGG CTCGAACCAC
GTCCTGCCGA CCGGAGGCTG CGCGCACTTC GCGAGCGGTC TCGGAGTGCA CAGCTTCATC
AAGGCCGTGC AGGTGGTCGA GTACACCGAG CAGGCGCTCG GGGAGATCGC GTCGAAGATC
GTCGCCTTCG CCAACGCGGA GGACCTCCCG GCGCACGGCG AGGCCGTGCA GGTGCGGTTC
TGA
|
|---|
| Protein sequence | MINRLDLRGR SLSARELVEA LPRAEVRVED AAERVAPIIA AVRRRGADEL RDLAERFDGV
RPHHLRVPAE AFESALAGLD PLVREAIEET ISRVRTVHRA QRPQDFVVDL ADGAQVRQRW
VPVGRVGLYV PGGLAVYPSS VVMNVVAAQE AGVPSLAVAS PPQSENAGLP HPTILAACAL
LGVDEVYAVG GAQAVAMFAY GARGTEEQDG AVLCEPVNVV TGPGNVYVAA AKRLVRGVVG
IDAEAGTTEI AILADGTAHP DHVAADLISQ AEHDPAAASV LVTSSVELAG AVEARLKDRA
EGTRHSDRVL QALAGPQSAI VLVDSVEQGI EVVDAYGAEH LEIQTADAAA VAERISNAGA
IFVGPYSPVA LGDYMAGSNH VLPTGGCAHF ASGLGVHSFI KAVQVVEYTE QALGEIASKI
VAFANAEDLP AHGEAVQVRF
|
|---|
| |