| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_22090 |
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| Symbol | |
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| ID | 8633844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2457163 |
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| End bp | 2460057 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | |
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| Product | uncharacterized membrane protein, putative virulence factor |
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| Protein accession | YP_003314962 |
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| Protein GI | 269795507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.339262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGCAC GGCTGGCGGC GGCGAGCCAG ACCCTCGCGG GGGCCGCCGT GATGATCACC
CTCGTCACGG TGCTGAGCCG GCTCCTCGGG TTCGGCCGCT GGGTCGTCCA GGCCAGCGAG
CTCGGCACCG GTGGGGTCGC GAGCGCCTAC GCGACCGCGA ACGTGCTCCC CAACGTGCTC
TTCGAGGTGG CTGCGGGCGG AGCGCTCGCC GGAGCGGTCG TCCCGCTGCT CGCCGGGCCG
ATCCTGCGCC GTGCGAAGGT CGACGTCGAC GCGATCGCCT CGGCGCTCCT CACCTGGGCG
GTCGTCGTCC TCGTCCCGCT CGGCCTGGCC CTCGCCGTCT TCGCGCGGCC CGTCATCGGG
CTGCTCCCCG GTGTGGGGAC CGGTCCCGAG GCTGACGTCG CGACCTACTT CTTGCGGGTC
TTCGCGATCC AGCTGCCGCT CTACGGCGTC GGCGTGGTGC TGGCCGGTGT GCTGCAGGCC
GGCCGCCGGT TCTTCTGGCC CGCCGCCGCC CCCATGTTCT CGAGCGTCGT GGTGATCGTC
GCGTACCTCG TGTTCGGACG CCTCGCCGAC GGGCAGCAGG GCAGCCCGGG CGAGCTCTCG
GCCGCGGCCG TCGGCTGGCT CGCGTGGGGC ACCACCGCGG GTGTCGCGGC CATGAGCCTG
CCGCTGCTCG TCCCCGCGCT GCGCACGGGC CTGCGGCTGC GCCCCAGCCT CCGGTTCCCC
GCGGGCGTCG GGTCGCGCGC CCGGCGGCTC GCGACGGCCG GCATCGGCGC GCTCGTCGCC
CAGCAGGTCT CCGTGCTCGT GGTGATGTAC GCGGCGCTCT CCTCGGGGGG CCAGCACACC
TTCAACGTCT ACCAGTATTC GCAGGCGGTC TACGTGCTCC CGTACGCGGT GCTCGCGGTC
CCGCTCGCGA CGAGCGCCTT CCCACGTCTC GCCGCTCGCG CCGACGCCGG CGACCGTGCC
GGGTTCGCCC GCCTGAGCGC TGTCGCGACC CGCGCGGTCG TCGCCGTGAG TGCGGTCGGC
GCCGCGGTCC TGCTGAGCGT CGCGGGCGCC GTCGAGGCGT TCTTCGACGC CTTCACCCCC
GGCGGTACAG ACGGCATGGC CGTCGCGATC GCGTGGTCCG CCCCGGGGCT CGTCGGGTTC
GCGCTGCTCT TCCTCCTCTC CCGGTCCCTC TACTCGCTCG ACGCGGGTCG CGCCGCGGTG
GTCGGCGCCG CCCTCGGGTG GGGAGCGGTC GTCGCCGTCG CCGCGGTGCT CCCGGCGGTG
CTCACCTCGG GGACGCAGGA CCAGACGCTC ACCCTGGCCT CCCTCGGCGC CGCCGGCTCC
GCCGGGATGC TCGTCGCCGG GGTGACGCTC CTCGGCGCCG TGCGCCGCCG GGCAGGCGCC
GCCGCTGTCG CGGGCCTGCC CCGCACTGCC GTCGTGGCCG TCCTCGCGGG CGCCGCAGGC
GGCTGGCTGG GGCACGCGCT CGCCGACCTC CTGCTGCCGA CCGGCGCCTC GGTCGTCGAG
GCGTTGCTGG CCGGCGTCGC CGCCGGGGTG CTCGCGCTCG TCGTCACCGC CGGGACCCTC
GTGGTGGCCG ACACCTCGGT CCGCGACCTC GTCCGCGCCC GGCGTGCGGG CACGGCGCCG
GAGCCTGGCG CAGCGTCAGA GCCGAGCACC GCGTCGGACT CAGGTACTGC GGCAGAGCCG
GCGGCAGTGC CCGTCGCCGG GACCGGCGAC GTCCTCGGTC CCGGCAGCCT CGCGACGCTC
CCTGACGTCC CGCCGGCCCG GGTCCTCCAG GTGCTCGGGT CGAGCGCCGG GGGAGTGGCC
CGCCACGTCG GACAGCTGGC TGCAGCGCTC GGAGCGCCGG GCAGCGCGGC CCCCTCGGTC
GTGGTCGTCG CGGGACCGGA GTCGGTCCGG ACCCTCGTCG CCTCCGAGCG CGTGCGCTTC
GTGCCGGTCG AGATCACCGA CCGGCCCCGG CCGACGGCCG ACCTCGGTGC GGTGCGCACG
CTGCGCGGTC TCTCGGCGCG TGCCGACGTG GTCCACGCGC ACGGCCTGCG TGCCGGTGCC
CTCGCCGTGA TCGCGGCCCG GTCGCTGCGG CAGGGACACC GGCCCACGAT CGTCGTGACG
CTCCACAACC TGCCGGTCGG CGGTCGTGCC GTCCGCACCG TCTCCGGTGT GCTCGAGCGC
GTGGTCGCCC GCGGGGCCGG CACGGTCCTC GGGGTGAGCA CCGACCTCGT CGAGCGCGCA
CGCGACCGCG GGGCCCGGTC GACGGCCCGG GCGCTCGTGC CCTCCCCGCA GCAGCAGGCC
CCCGACGTCC CCGACCGGGC CACGACGCGT GCGGGGCTCG GCCTCGGGCC GGACGAGCGT
CTGGTCGTGA CGGTCGGGCG CCTCGCGCTC CAGAAGGGCC TGCCGACGCT GCTCGACGCC
GTCGCGCACG TCGGGCGCAC GGCCCCGCAG CACCGGGTGC GGTGGGTGGT CGCCGGAGGC
GGGCCGCTGC ACGACGAGCT GGCCCGTCGC GTGCGTGACG AGCGTCTCCC CGTCGACCTG
CTCGGACCGC GCGACGACGT CGCCGCCCTC CAGGGGGCCG CCGACATAGT GGTCAGCGCA
GCGGTCTGGG AGGGGCAGCC GCTCAACCTG CAGGAGGCGC TGCGCGTCGG GGCCGCGGTG
GTCGCCACCG ACGCCGGAGG CACCCGGGAG GTCACGGGAG ACGCCGCTGT GCTGGTCCCC
GTGGGCGACG CGGCCGCCCT CGCCGACGCC GTCGCGGTCC TGCTGTCCGA CCCCGAGGCC
CTCGCCGACA GGCGCCGCCG CTCGCTCGTC CAGGCCTCCG CGCTCCCGAC CGTGGGCGAC
GCTGTGACGC AGCTCGCCAC CGTGTACCAC CGGCCTTCCC CGGCCGGGGG CCTCCCGGCC
CGACCCGTCG ACTGA
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| Protein sequence | MRARLAAASQ TLAGAAVMIT LVTVLSRLLG FGRWVVQASE LGTGGVASAY ATANVLPNVL
FEVAAGGALA GAVVPLLAGP ILRRAKVDVD AIASALLTWA VVVLVPLGLA LAVFARPVIG
LLPGVGTGPE ADVATYFLRV FAIQLPLYGV GVVLAGVLQA GRRFFWPAAA PMFSSVVVIV
AYLVFGRLAD GQQGSPGELS AAAVGWLAWG TTAGVAAMSL PLLVPALRTG LRLRPSLRFP
AGVGSRARRL ATAGIGALVA QQVSVLVVMY AALSSGGQHT FNVYQYSQAV YVLPYAVLAV
PLATSAFPRL AARADAGDRA GFARLSAVAT RAVVAVSAVG AAVLLSVAGA VEAFFDAFTP
GGTDGMAVAI AWSAPGLVGF ALLFLLSRSL YSLDAGRAAV VGAALGWGAV VAVAAVLPAV
LTSGTQDQTL TLASLGAAGS AGMLVAGVTL LGAVRRRAGA AAVAGLPRTA VVAVLAGAAG
GWLGHALADL LLPTGASVVE ALLAGVAAGV LALVVTAGTL VVADTSVRDL VRARRAGTAP
EPGAASEPST ASDSGTAAEP AAVPVAGTGD VLGPGSLATL PDVPPARVLQ VLGSSAGGVA
RHVGQLAAAL GAPGSAAPSV VVVAGPESVR TLVASERVRF VPVEITDRPR PTADLGAVRT
LRGLSARADV VHAHGLRAGA LAVIAARSLR QGHRPTIVVT LHNLPVGGRA VRTVSGVLER
VVARGAGTVL GVSTDLVERA RDRGARSTAR ALVPSPQQQA PDVPDRATTR AGLGLGPDER
LVVTVGRLAL QKGLPTLLDA VAHVGRTAPQ HRVRWVVAGG GPLHDELARR VRDERLPVDL
LGPRDDVAAL QGAADIVVSA AVWEGQPLNL QEALRVGAAV VATDAGGTRE VTGDAAVLVP
VGDAAALADA VAVLLSDPEA LADRRRRSLV QASALPTVGD AVTQLATVYH RPSPAGGLPA
RPVD
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