Gene Sked_21830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21830 
Symbol 
ID8633818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2430593 
End bp2432191 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content69% 
IMG OID 
ProductATPase component of ABC transporters with duplicated ATPase domain 
Protein accessionYP_003314937 
Protein GI269795482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.976658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCTG CCCATGCCGT CGAGCTTCGA GTCGGAGCCC GCGTGCTCCT CGAAGAGGCG 
TCCTTCCGCA TCGCACCTGG CGACAGGATC GGGCTGGTCG GCCGCAACGG TGCCGGCAAG
ACGACCCTCA CCAAGACCCT CGCGGGGGAG ACGCAGCCCA CCGGCGGCCA GATCACCCGC
ACGGGCGACA TCGGCTACCT CCCGCAGGAC TCCAAGTCCG GCGACATGGA CATGATCGCC
ATGGACCGCG TGCTCTCGGC GCGCAGCCTC GACAAGCTGG TCCGTCAGAT GCGCGACACC
GAGGGCGAGA TGGCCTCGGC AGACGAAGAG ACGCAGATGG CCGCCATGGA GCGCTACCCG
CGCCTCGAGG AGCGGTTCAC CGCAGCCGGC GGCTACGCCG CCGAGAGCGA GGCCGAGCGC
ATCGCCTCGA ACCTCGGTCT CTCCGAGCGT GTCCTCGAGC AGCAGCTCGG CACGCTCTCG
GGTGGTCAGC GCCGCCGCGT GGAGCTCGCC CGCATCCTCT TCTCCGGCGT GGGCACTCTG
CTCCTCGACG AGCCCACCAA CCACCTCGAC GCCGACTCGA TCATGTGGCT GCGCGAGTAC
CTCAAGTCGT ACTCCGGCGG CTTCATCGTC ATCAGCCACG ACACCGAGCT CATGCGCGCC
ACCGTCAACA AGGTGTTCCA CCTGGACGCC AACCGCGGCG AGATGGACCA GTACAGCCTC
GGCTGGGACG CCTACCTCGA GCAGCGCGAG ACCGACGAGC GTCGTCGACG CCGTGAGCGC
GCGAACGCCG AGAAGAAGGC GGGCGTGCTG CTCGTCCAGG CCGAGAAGAT GCGCGCGAAG
GCCACCAAGG CCGTCGCCGC CCAGAACATG ATCCGGCGCG CCGAGCGCAT GCTGTCGTCC
CTCGAGGGCG AGCGCGTGAG CGACCGCGTG GCCAAGCTGC GCTTCCCGAC CCCCGCGCCC
TGCGGCAAGA CGCCGCTCAC GGCGTCGGGC CTCAGCAAGG CCTACGGCTC GCAGGAGGTG
TTCACCGGGG TCGACCTCGC GATCGACCGC GGCTCGCGCG TGGTCATCCT CGGCCTCAAC
GGAGCCGGCA AGACGACGCT GCTGCGCATC CTGGCGGGTG TCGAGGAGTC GGACAGCGGG
ACGGTCAACC CCGGCCACGG TCTCAAGCTC GGGTACTACG CTCAGGAGCA CGACACCCTC
GACCTCGACG CCACCGTCGT CGAGAACCTG CGGCACAGCG CCCCGGACCT CAGCGACACC
GAGGTCCGCT CCGTCCTCGG GTCGTTCCTC TTCTCGGGGG ACGACGCCGA GAAGCGCACC
AACGTGCTCT CCGGCGGTGA GAAGACGCGT CTGGCGCTCG CCACGATCGT CGTCTCGGGC
GCCAACGTGC TCCTGCTCGA CGAGCCCACC AACAACCTCG ACCCTGCGTC GCGGGCCGAG
ATCCTCGGGG CGCTCAAGAC CTACGAGGGC GCCGTCGTCA TGGTCACCCA CGACCACGGT
GCCGTGGAGG CGCTCTCGCC CGAGCGTGTC CTGCTGCTGC CCGACGGCGA CGAGGACCAC
TGGAACGACT CCTACGCCGA GCTCATCGAG CTCGCCTGA
 
Protein sequence
MISAHAVELR VGARVLLEEA SFRIAPGDRI GLVGRNGAGK TTLTKTLAGE TQPTGGQITR 
TGDIGYLPQD SKSGDMDMIA MDRVLSARSL DKLVRQMRDT EGEMASADEE TQMAAMERYP
RLEERFTAAG GYAAESEAER IASNLGLSER VLEQQLGTLS GGQRRRVELA RILFSGVGTL
LLDEPTNHLD ADSIMWLREY LKSYSGGFIV ISHDTELMRA TVNKVFHLDA NRGEMDQYSL
GWDAYLEQRE TDERRRRRER ANAEKKAGVL LVQAEKMRAK ATKAVAAQNM IRRAERMLSS
LEGERVSDRV AKLRFPTPAP CGKTPLTASG LSKAYGSQEV FTGVDLAIDR GSRVVILGLN
GAGKTTLLRI LAGVEESDSG TVNPGHGLKL GYYAQEHDTL DLDATVVENL RHSAPDLSDT
EVRSVLGSFL FSGDDAEKRT NVLSGGEKTR LALATIVVSG ANVLLLDEPT NNLDPASRAE
ILGALKTYEG AVVMVTHDHG AVEALSPERV LLLPDGDEDH WNDSYAELIE LA