Gene Sked_21730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21730 
Symbol 
ID8633808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2420543 
End bp2421757 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content74% 
IMG OID 
Productglycogen synthase 
Protein accessionYP_003314927 
Protein GI269795472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCGTG AGTACCCCCC GTTCGTCTAC GGCGGGGCTG GTGTCCACGT CGCCGAGCTG 
TCGGCCGTGC TGCGCAGCCG CGTCGACGTG CGCGTCCGCT GCTTCGACGG CCCCCGGACC
GGTGACGACG CCCAGGAGGG CGTCACCGGG TACGCGCCAC CGCCGGACCT CGAGGGAGCC
AACCCGGCGC TCGCGACCTT CGGCGTGGAC CTCGCCATGG CGGGCGACGT GGCCGGCGCG
GACCTCGTGC ACTCCCACAC CTGGTACGCG AACCTCGGCG GGCACCTCGC CGGTCTGCTG
CACGGGATCC CGCACGTGCT CTCGGCGCAC TCCCTCGAGC CGCTGCGCCC GTGGAAGGCC
GAGCAGCTCG GCGGCGGCTA CGCGCTGTCC GGCTGGGCCG AGAAGACCGC CTACGAGGGT
GCCGCCGGCA TCATCGCGGT GAGCGCCGGC ATGCGCGCCG ACATCCTGCG GTCCTACCCC
GACGTCGACC CGGCCAAGGT GCACGTGGTG CACAACGGCA TCGACCTCGA CGGATGGGTC
CGACCCACCG GTGACGAGGC CGTGCGCGCC GACTCCGTCG TGCGTGCGCT CGGGATCGAC
CCGGAGCGTC CCGCCGTGGT GTTCGTCGGT CGCATCACGC GGCAGAAGGG CCTGCCGTAC
CTGCTCCAGG CGGCGGACCG GCTGCCCGAG GACGTCCAGC TGATCCTCTG CGCCGGGGCC
CCCGACACCC CGGAGATCGC CACCGAGGTG GCCACGGCCG TCGCCGAGCT CTCGTCCCGC
CGCGAGGGCG TCGTGTGGAT CGAGGAGATG CTCCCGCGCC CCGACCTCGT CGCCGTGCTC
GCCGCGTCGA CCGTGTTCGT GTGCCCCTCC GTCTACGAGC CGCTCGGCAT CGTGAACCTC
GAGGCCATGG CCGTGGGCCT GCCCGTGGTC GGCAGCGCGA CCGGCGGGAT CCCCGAGGTC
GTCGACGACG GCGTCACCGG CCTGCTGGTG CCCATCGACC AGGTGCAGGA CGGCACGGGG
ACCCCGACGG ACCCCGAGCG CTTCGTCGCC GACCTGGCCA AGGCCCTCAC CGACGTCGTC
ACCGACCCCG AGCGTGCCGC CGCGATGGGC GTGGCCGCCC GCAAGCGCGT CGAGGACCAC
TTCGCGTGGG ACGCCATCGC CGACCGCACC CTCGAGGTCT ACCAGACCGT CCTCGACCAG
TGGGCGGCGC GCTAG
 
Protein sequence
MTREYPPFVY GGAGVHVAEL SAVLRSRVDV RVRCFDGPRT GDDAQEGVTG YAPPPDLEGA 
NPALATFGVD LAMAGDVAGA DLVHSHTWYA NLGGHLAGLL HGIPHVLSAH SLEPLRPWKA
EQLGGGYALS GWAEKTAYEG AAGIIAVSAG MRADILRSYP DVDPAKVHVV HNGIDLDGWV
RPTGDEAVRA DSVVRALGID PERPAVVFVG RITRQKGLPY LLQAADRLPE DVQLILCAGA
PDTPEIATEV ATAVAELSSR REGVVWIEEM LPRPDLVAVL AASTVFVCPS VYEPLGIVNL
EAMAVGLPVV GSATGGIPEV VDDGVTGLLV PIDQVQDGTG TPTDPERFVA DLAKALTDVV
TDPERAAAMG VAARKRVEDH FAWDAIADRT LEVYQTVLDQ WAAR