Gene Sked_21000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21000 
Symbol 
ID8633735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2343118 
End bp2344068 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content76% 
IMG OID 
Productpredicted oxidoreductase, aryl-alcohol dehydrogenase like protein 
Protein accessionYP_003314856 
Protein GI269795401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.669588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACC GCCGCCTCGG CCGCACCGGC CTGCACGTCT CCGCGATCGG TCTGGGGACC 
ATGACCTGGG GTCGCGAGAC CGACGCGCAG GACGCCGCGG AGCAGCTGCG CGACTTCGCC
GACGCCGGCG GCACGCTGGT CGACACCGCG GGCTCCTACG CCGACGGCGC GAGCGAGGAG
ATCCTCGGCT CCCTGGTCGG CTCGGTGGTG CACCGCGACG ACCTCGTGCT GACCACCAAG
GGTGGGCTGC GCCGCTCTCC GCAGGGCACG GTCGTGGACT CCTCCCGGCG CGCCCTGCTC
TCCGACCTCG ACGCGTCCCT GGCCCGGCTG GGCACCGACC ACGTCGACCT CTTCCTGGTC
CAGGCGCCCG ACCTGGGCAC GCCGCTCGAC GAGACGGTCG CCGCCCTCGC GCACGCCGTG
TCGTCCGGCC GGACCCGCTA CGTGGGCCTG TCGAACCACA GCTCCTGGCA CATCGGGTAC
GTCGCGGGTC GCCTGGCCGG CAGCGACGGC CCGGGCCTCG CGGCGGTCGA GGTGGAGCAC
TCGCTGCTGG CCCGCGAGGT CGAGCGCAGC CTGGTCCCCG CGTCGCAGGC GCTCGGCGTC
GGCGTGCTCG GGTGGTCTGC GCTCGGCCGT GGCGTGCTGA CCGGCAAGTA CCGGGGCACC
GTGCCGCCGG GGTCACGCGG CGCCTCGGCG CACCTCGCCG GGTTCGTCGA GCCCTACCTC
TCCGGGCCGG CCTCGTCCGT GGTCGACGCG TTGTGCACGG CTGCGTCAGG TCTCGGGCGC
TCGCCGCTCG AGGTCGCGCT CGCGTGGCTG CTCGAGCGCG GCTACCTGTC GTCGGCGATC
GTCGGGGCGA GGACCCCGGC GCAGCTGCGC GAGATCCTCG GCGCCGACGG CCTCGAGCTG
CCGTCGGCGG TGAGCCGGGC CCTCGACGAC GTCAGCGCGC CGCAGGCCTG A
 
Protein sequence
MEHRRLGRTG LHVSAIGLGT MTWGRETDAQ DAAEQLRDFA DAGGTLVDTA GSYADGASEE 
ILGSLVGSVV HRDDLVLTTK GGLRRSPQGT VVDSSRRALL SDLDASLARL GTDHVDLFLV
QAPDLGTPLD ETVAALAHAV SSGRTRYVGL SNHSSWHIGY VAGRLAGSDG PGLAAVEVEH
SLLAREVERS LVPASQALGV GVLGWSALGR GVLTGKYRGT VPPGSRGASA HLAGFVEPYL
SGPASSVVDA LCTAASGLGR SPLEVALAWL LERGYLSSAI VGARTPAQLR EILGADGLEL
PSAVSRALDD VSAPQA