Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_20960 |
Symbol | |
ID | 8633731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2338609 |
End bp | 2339541 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | predicted transcriptional regulator |
Protein accession | YP_003314852 |
Protein GI | 269795397 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.376744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.903432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCGT CCATCACGTC GCCGCGACAG GTCAAGATCG GTGACGCCGC AGCGTTCGTC GGCACCACAC CCCGGGCGAT CCGTCACTAC CACGCGATCG GCCTGCTCCC CGAGCCTGAG CGGGGTGGTG ACGGCCGCCG CCGCTACGGC TACGACGAGA TCATCCGGCT GCTGTGGATC CGCAAGATGG CCGATGCAGG CGTCGCCCTG GACGACGTCC GCGACGCCTT CGCCGACGCG GCACCTGCGG GAGCCGACGG CGAGAGCAGC AGCGGCGACG TCGCAGACGT CCTGGCGCGG CTGGAGCAGA ACCTCGTGGC CCAGGAGGCC GAGCTGCGGC GCCAGCGAGC CGCCGTCGAG CGGATGCGCA CCCGGGGCAG CCGGCTCGGT CTGCTCGACG ACCTCGTCTC CCGCCGCCTC GAGGGTCTGC CCGAGGGATC CCTGCGCCAG GCAGACCTCG ACACCCTGCT GGTCACGGAG CGGATCTTCA GCCCGCTCGG CGCCGCCGTC CAGGCCGGCC GCTTCGTCGC CCTGGCCACC ACCCCTGGTC TGCGGGAGGA GTCCGACCGT GTCGACGCCG CGGAGGAGGC CCTCGACGAC ACGGTCGCCG TCGACGACCC TCGCGTCGCG CAGGTCGCCG AGCAGCGGCA CGTGTTCGAG CTCGCGCTGC ACGCGGCCAT GGAGAACTCC GGGGCTGCGC AGGAGGACGA CGCGCTCTTC GACGCCTGGG ACGAGCTGCA CCCCGCTGAC GAACCCGCGT GCACGGCCAG CAGCCCTGCT CGTGGACGAG AGCCGAGGAC CGTCGTCGAG GCCGTCGGGA TGATGCCCTA CGACTTCTCC CCGGCGCGCG TGCGGTGCAT GGAGCTGGCC CTGGAGCTGA GCATGGAGAC GTCCGTCGCC GAGGCACCCG CCCCTGAGGC ACCGGCCCCG TGA
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Protein sequence | MLSSITSPRQ VKIGDAAAFV GTTPRAIRHY HAIGLLPEPE RGGDGRRRYG YDEIIRLLWI RKMADAGVAL DDVRDAFADA APAGADGESS SGDVADVLAR LEQNLVAQEA ELRRQRAAVE RMRTRGSRLG LLDDLVSRRL EGLPEGSLRQ ADLDTLLVTE RIFSPLGAAV QAGRFVALAT TPGLREESDR VDAAEEALDD TVAVDDPRVA QVAEQRHVFE LALHAAMENS GAAQEDDALF DAWDELHPAD EPACTASSPA RGREPRTVVE AVGMMPYDFS PARVRCMELA LELSMETSVA EAPAPEAPAP
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