Gene Sked_20960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20960 
Symbol 
ID8633731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2338609 
End bp2339541 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content73% 
IMG OID 
Productpredicted transcriptional regulator 
Protein accessionYP_003314852 
Protein GI269795397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.376744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.903432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCGT CCATCACGTC GCCGCGACAG GTCAAGATCG GTGACGCCGC AGCGTTCGTC 
GGCACCACAC CCCGGGCGAT CCGTCACTAC CACGCGATCG GCCTGCTCCC CGAGCCTGAG
CGGGGTGGTG ACGGCCGCCG CCGCTACGGC TACGACGAGA TCATCCGGCT GCTGTGGATC
CGCAAGATGG CCGATGCAGG CGTCGCCCTG GACGACGTCC GCGACGCCTT CGCCGACGCG
GCACCTGCGG GAGCCGACGG CGAGAGCAGC AGCGGCGACG TCGCAGACGT CCTGGCGCGG
CTGGAGCAGA ACCTCGTGGC CCAGGAGGCC GAGCTGCGGC GCCAGCGAGC CGCCGTCGAG
CGGATGCGCA CCCGGGGCAG CCGGCTCGGT CTGCTCGACG ACCTCGTCTC CCGCCGCCTC
GAGGGTCTGC CCGAGGGATC CCTGCGCCAG GCAGACCTCG ACACCCTGCT GGTCACGGAG
CGGATCTTCA GCCCGCTCGG CGCCGCCGTC CAGGCCGGCC GCTTCGTCGC CCTGGCCACC
ACCCCTGGTC TGCGGGAGGA GTCCGACCGT GTCGACGCCG CGGAGGAGGC CCTCGACGAC
ACGGTCGCCG TCGACGACCC TCGCGTCGCG CAGGTCGCCG AGCAGCGGCA CGTGTTCGAG
CTCGCGCTGC ACGCGGCCAT GGAGAACTCC GGGGCTGCGC AGGAGGACGA CGCGCTCTTC
GACGCCTGGG ACGAGCTGCA CCCCGCTGAC GAACCCGCGT GCACGGCCAG CAGCCCTGCT
CGTGGACGAG AGCCGAGGAC CGTCGTCGAG GCCGTCGGGA TGATGCCCTA CGACTTCTCC
CCGGCGCGCG TGCGGTGCAT GGAGCTGGCC CTGGAGCTGA GCATGGAGAC GTCCGTCGCC
GAGGCACCCG CCCCTGAGGC ACCGGCCCCG TGA
 
Protein sequence
MLSSITSPRQ VKIGDAAAFV GTTPRAIRHY HAIGLLPEPE RGGDGRRRYG YDEIIRLLWI 
RKMADAGVAL DDVRDAFADA APAGADGESS SGDVADVLAR LEQNLVAQEA ELRRQRAAVE
RMRTRGSRLG LLDDLVSRRL EGLPEGSLRQ ADLDTLLVTE RIFSPLGAAV QAGRFVALAT
TPGLREESDR VDAAEEALDD TVAVDDPRVA QVAEQRHVFE LALHAAMENS GAAQEDDALF
DAWDELHPAD EPACTASSPA RGREPRTVVE AVGMMPYDFS PARVRCMELA LELSMETSVA
EAPAPEAPAP