Gene Sked_20890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20890 
Symbol 
ID8633724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2330028 
End bp2331617 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative proteasome component/protein of unknown function, DUF275 
Protein accessionYP_003314845 
Protein GI269795390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATCG AGACCGAGTA CGGCGTCCAC CAGCAGGGGA ACCCGGCCGC CAACCCGATG 
CTCATGTCGA GCCAGGTGGT GACGGCCTAC CGGGCGATCG CGTCGTCGGC CCGCTCGCGT
GCGCGCTGGG ACTACGACGA CGAGGACCCG CTGCTCGACG CGCGAGGCTT CCACGTGCGC
CGCGCCTCGG CGCACCCGTC GCTGCTCACC GACGACCCGA CCCGACCCGC GCCCGCCGGT
CCGGTCGCGG GCGAGCCCCA GGTGCAGAGC ATCGAGCGCC CGACCGTCGA GGCCTACGAC
GACCCGAGCG CCGCGAACGC GATCCTCACC AACGGGGCCC GGCTGTACGT CGACCACGCC
CACCCGGAGT ACTCCTCGCC CGAGGTGACG AACCCGCTCG ACGGCGTCCG CTGGGACGTG
GCCGGGGAGC GCGTCATGGT CGCCGCGGCG CGCGAGGTCG CCGCGCACAT GGGCGTGGAC
CTCCAGCTGT ACAAGAACAA CGTCGACGGC AAGGGCGCGA GCTACGGCAC GCACGAGAAC
TACCTCGTGG ACCGCGCCGT GCCCTTCGGC GTGATCGTCG AGCTCCTCAC GACCTTCCTC
GTGACCCGGA CCGTGTTCAC GGGCTCCGGG CGCGTGGGCC TGGGACCGAC CGGCCAGCAG
GCCGGCTTCC AGATGTCGCA GCGCGCCGAC TACATGGAGG CCGAGGTCGG CCTCGAGACG
ACGCTGCGCC GCCCGATCGT CAACACCCGT GACGAGCCGC ACGCGGACCG CAGGCGGTGG
CGCCGCCTCC ACCTCATCAT CGGCGACGCG AACCTCTTCG AGACCGCGAC GTACCTCAAG
CTCGGCTCCA CGTCCGCGGT CCTGTGGGCG CTCGAGCACC TGGAAGAGCT CCCGGGGGCC
CAGGCGGCGC TCGCCGCGCT GCGCCTGCAC GACCCCGTGG CGGCGGTGTC CCAGGTGAGC
CGCGACCTCG CGCTCACCCA GGAGCTCGAG ACGGCCGACG GCCGACGGAT GACGGCCCTC
GCCCTCCAGC AGGCGTACCT CGACGTGGTC CGCGACGCGG TCGACGCCCT CGGCTCCCAC
GACCCGGCGA CCGACGAGGT CCTCGGTCGC TGGGCGAGCG TCCTCGACCG CCTCGCGACC
GACCGGGCCT CCTGCGCCCG GGACGTCGAG TGGGTCGCGA AGCTGCGCCT GCTCGAGGGG
CTGCGCAGCC GCGACGGGCT CGCGTGGGAC CACCCCCGGC TGCGCGCGAT GGACCTGCAG
TGGTCGGACG TGCGCCCTGA GCGCAGCATC TACCAGCGGC TCGTCACGGC CGGCGCGGTG
GAGCGTCTCG TGACCGAGGA GTCCGTCGTC GAGGCGGTGG CCCACCCGCC GACCGACACC
CGGGCGTACT TCAGGGGCGA GGTCATGGCC CGGTTCCCGG CCGTGGTGTC GGCCGCGAGC
TGGGACTCGG TGATCTTCGA CCTGCCCGGG GCTCCCTCGC TCCAGCGGGT CCCGATGATG
GACCCGTGGC GCGGCAGCGA GCAGCACGTC GGCCGGCTCT TCGCCGAGAG CCCGGACGCC
GAGACGTTCC TGGCGGCGCT GCTCGGCTGA
 
Protein sequence
MGIETEYGVH QQGNPAANPM LMSSQVVTAY RAIASSARSR ARWDYDDEDP LLDARGFHVR 
RASAHPSLLT DDPTRPAPAG PVAGEPQVQS IERPTVEAYD DPSAANAILT NGARLYVDHA
HPEYSSPEVT NPLDGVRWDV AGERVMVAAA REVAAHMGVD LQLYKNNVDG KGASYGTHEN
YLVDRAVPFG VIVELLTTFL VTRTVFTGSG RVGLGPTGQQ AGFQMSQRAD YMEAEVGLET
TLRRPIVNTR DEPHADRRRW RRLHLIIGDA NLFETATYLK LGSTSAVLWA LEHLEELPGA
QAALAALRLH DPVAAVSQVS RDLALTQELE TADGRRMTAL ALQQAYLDVV RDAVDALGSH
DPATDEVLGR WASVLDRLAT DRASCARDVE WVAKLRLLEG LRSRDGLAWD HPRLRAMDLQ
WSDVRPERSI YQRLVTAGAV ERLVTEESVV EAVAHPPTDT RAYFRGEVMA RFPAVVSAAS
WDSVIFDLPG APSLQRVPMM DPWRGSEQHV GRLFAESPDA ETFLAALLG