| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_20440 |
|---|
| Symbol | |
|---|
| ID | 8633679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2276827 |
|---|
| End bp | 2277810 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Zn-dependent oxidoreductase, NADPH:quinone reductase |
|---|
| Protein accession | YP_003314800 |
|---|
| Protein GI | 269795345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTCG GGGCGGTCGC CGCACGACCA GGACCGCTCG CGGAGGTCGT CTCGGTACGA
GACCTGCCCG CGCAGCGGAC CCTCGGTGAC CACGAGGTGA TCGTGCGGAT GACCTCCGCC
GCGCTCAACC CCTCCGACGA GATCACCGTC TCCGGGGCCT ACGGCTCGCG CACGCGGTTC
CCCCTCGTCC CCGGCTTCGA GGGCGTCGGG GAGGTCGTGC ACGCCGGACG TCTCGTGCCG
CCGTCGGCGC TGGGGGCGCG CGTCCTGCCG ATCGGGTCTG CCGGCACGTG GCAGGAGCTC
AGGACCGTCG AGCACCCGTG GTGCGTCCCG GTCCCCGAGA GCCTCGACGA CACCTCGGGG
TGCTTCGCCT ACGTCAACCC GCTCACAGCG GTGCTCCTGG TCGACAGGTA CTCGTCTCCG
CCGGTGCGGG AGGTCGTCGT GACCGCTGCG ACCTCCACCG TCGCAGGCCA TCTCGCGGAG
CTCCTGGCGC TCCGTGGGAT CCACGCAGTC GGCCTGCACC GCCGTCAGCC CGGGTGGACC
GACAGCCGGG CAGCACCGTG GAAAGCCCTG GTGAGCACGC AGGACAGCTC GTGGGCCGAC
CAGGTCCGGG CGGCGACCGG AGGGCGCGGC GTCGACGTCG TCCTCGACTG CGTCGGCGGC
ACGGTGGGAG ACCGGCTCGT GCCGATGCTC CGCCCCGGTG GGGTGCTGGT GCTCTACGGC
CTGCTCTCGG GGGTGCCGCT GGCAGGGAGG AGCCTCGTGC CGCAGGACGG TCGCCACGTC
GAGATGTTCC GGCTCCGTGA CACGGTCCAC ACGGTGCCGA GACTCGCGCT CCCTGCGCTC
TTCGCCCCGG TCTTCGAGCA CCTGGACGCC GGGCGCCTGC GCACCGAGGT CACCCGGCGC
GTCGCCCTGT CCGACCTGCC CGACGCCTTC CGAGCCGGCC TGCACGCCGA CGCGGGTGCG
GTCGAGATCC TCACGGCGCC GTGA
|
|---|
| Protein sequence | MTLGAVAARP GPLAEVVSVR DLPAQRTLGD HEVIVRMTSA ALNPSDEITV SGAYGSRTRF
PLVPGFEGVG EVVHAGRLVP PSALGARVLP IGSAGTWQEL RTVEHPWCVP VPESLDDTSG
CFAYVNPLTA VLLVDRYSSP PVREVVVTAA TSTVAGHLAE LLALRGIHAV GLHRRQPGWT
DSRAAPWKAL VSTQDSSWAD QVRAATGGRG VDVVLDCVGG TVGDRLVPML RPGGVLVLYG
LLSGVPLAGR SLVPQDGRHV EMFRLRDTVH TVPRLALPAL FAPVFEHLDA GRLRTEVTRR
VALSDLPDAF RAGLHADAGA VEILTAP
|
|---|
| |