Gene Sked_20340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20340 
Symbol 
ID8633669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand+ 
Start bp2266344 
End bp2266898 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314790 
Protein GI269795335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.356712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.338631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACAC CACTGATCCT CAGCGCCACG CTCACGGCCC TGCTCGTCCT GGCTGGGTGC 
GGCGACGCCG ACGCCCCCGA CGCGCCGTCG GGCGCTGCCG CGCCGAGCAC GTCACCAGTG 
CCGTCGACGC AGCCCTCACC GTCGGCCCCA GAGCCCGCAC CGGCGCCGAC GGCCGCGCCT 
GATGAGGGGG TGGTGGGGGC CGTGGTCCGG TTCTCCTCGG GCCAGACGTC GATCGACGTC 
ACCATCGGCG AAGACAACCC CACGGTCCGC GACCTGCTGT CGATCTTGCC GGTGACCACG 
ACGGTCGAGG AGTTCGCCGG CCGCGAGAAG ATCGCCTACC TCGACCGCCA GCTCGACACC 
TCAGGGTCCC CAGGGTCAGA CCCCGAAGAC GGAGACCTCA TCTACTTCAC GCCCTGGGGG 
AACCTCGGTC TCTACTACGA CGCCTCCGGG ATCGGGTACT CCGACCAGAC AGTCCACATC 
GGGACCTACG ACGCCTCAGA AGAAGAGCTG TCGGCCCTGG AAGGTGGAGA CGTCACCATC 
AGCGTCGTGC CATGA
 
Protein sequence
MRTPLILSAT LTALLVLAGC GDADAPDAPS GAAAPSTSPV PSTQPSPSAP EPAPAPTAAP 
DEGVVGAVVR FSSGQTSIDV TIGEDNPTVR DLLSILPVTT TVEEFAGREK IAYLDRQLDT 
SGSPGSDPED GDLIYFTPWG NLGLYYDASG IGYSDQTVHI GTYDASEEEL SALEGGDVTI 
SVVP