Gene Sked_18740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18740 
Symbol 
ID8633509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2079254 
End bp2080339 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content77% 
IMG OID 
Productserine-pyruvate aminotransferase 
Protein accessionYP_003314633 
Protein GI269795178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.366699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCT TCGACCCGTC GACGCTGCTC GACCCGCCCC CGCTCGAGGC TGCGACCCTG 
GCGCGCATCG AGCAGCAGGT CGCTGCGCTG CTCGGGACCG ACGACACCGT CGTGCTGTTC
CAGGCCGAGG CGATCCTCGC GCTCGAGGCC GTCGCGACCG CCCTGGCGGC ACCGGGACGC
CGTGCGGTCA ACGTCGCCAC GGGACCCTAC GGCGTGATCT TCGGCGACTG GATGCGGCGG
GCCGGGGCGG AGGTCGTCGA CGTCACGAGC GCGCTCGACT CCGTCGCGAC GGTCGATCAG
GTCGTCGCCG CCCTGGACGC GCACCCCGGC ACCGAGATCC TGGCCCTCGC CCACGCCGAG
GCCGCGACCG GTGGGTCCAA CCCGGTCGCG GAGATCGTGC GGGCCGCGCG CGAGCGCGGC
GTCGTGACCG TCGTCGACGC GGTCGCGTCG GTCGGGGCCG AGCCCGTCGA GCCGTCCGTC
TGGGGCACCG ACGTCTGCGT GATCGGGCCG CAGAAGGCCC TCGCCGGTCC CGCAGGCGTC
AGCGCTGCGA CGGTGTCGGA CCGCGCCTGG GCGCTGGCCG GGTCGAACCC GTCAGCGCTC
CGGACGTCGT CGCTGTCGCT GCTCGACTGG CGCGACGGCT GGCTGCGGAG CGACCGGACG
GTCGTCCCCG GCACGCCGTC GGTGCTCGAG ACGCGTGCGC TCGGAGCGGC GCTCGACCGC
GTGGAGGCCG AGGGGCTCGA GGCCGTGATC GCACGGCACG AGGCTGCTGC TGCACGCGCC
CGGGCCGGCC TTGGCGCGCT CGGGCTGCGG ACCTGGCAGC GGGGGCCGCT CGGGTACGCC
TCCGTGGTGA CGACGGTCGC CGTCCCCGAC GGGGTCGACG GTCATGCCTT CAGCCGGGCG
GCGGTCGCCG CCGGGGGAGG GCTCGTCATG GCAGGCCCAG GGGCCCTCGC GGGGCGCCTG
GTCCGCATCA ACCACACCGG GCGCCAGGCG ACCCCGGAGG CGGTCGACCG TGGGCTCGAG
GCGCTGCACG GGGCTGTGCG GGCTGTCGGT GCAGGCGGTG CGGTGGGCGC GAGGCCGACC
GCCTGA
 
Protein sequence
MTTFDPSTLL DPPPLEAATL ARIEQQVAAL LGTDDTVVLF QAEAILALEA VATALAAPGR 
RAVNVATGPY GVIFGDWMRR AGAEVVDVTS ALDSVATVDQ VVAALDAHPG TEILALAHAE
AATGGSNPVA EIVRAARERG VVTVVDAVAS VGAEPVEPSV WGTDVCVIGP QKALAGPAGV
SAATVSDRAW ALAGSNPSAL RTSSLSLLDW RDGWLRSDRT VVPGTPSVLE TRALGAALDR
VEAEGLEAVI ARHEAAAARA RAGLGALGLR TWQRGPLGYA SVVTTVAVPD GVDGHAFSRA
AVAAGGGLVM AGPGALAGRL VRINHTGRQA TPEAVDRGLE ALHGAVRAVG AGGAVGARPT
A