Gene Sked_18700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18700 
Symbol 
ID8633505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2075506 
End bp2076651 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content70% 
IMG OID 
Productflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase 
Protein accessionYP_003314629 
Protein GI269795174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.545642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGT TCGGGATCTT CACCGTCGGC GACGTCACCC CTGACCCGAC CACAGGCCGC 
ACCCCCACGG AGAACGAGCG GATCAAGGCG ACGATCGCCA TCGCCCGCAA GGCCGAGGAG
GTCGGGCTGG ACGTCTTCGC GACCGGCGAG CACCACAACC CGCCCTTCGT GCCGTCCTCC
CCCACCACCA CCCTGGCCTT CATCGCCGCG CAGACCGAGC GCATCCTGCT CTCGACCTCC
ACGACGCTCA TCACCACGAA CGACCCGGTG AAGATCGCCG AGGACTACGC GACGCTCCAG
CACCTGGCCG ACGGCCGCAC GGACCTCATG ATGGGCCGCG GCAACACCGG GCCCGTCTAC
CCGTGGTTCG GCAAGGACAT CCGGCAGGGC ATCAACCTCG CGATCGAGAA CTACGCGCTG
CTGCACCGCC TGTGGCGCGA GGACGTCGTC GACTGGGAAG GGAAGTTCCG CACCCCGCTG
CAGGGCTTCA CGGCCACGCC GCGCCCCCTC GACGGGGTCC CGCCCTTCGT GTGGCACGGC
TCGATCCGCA CCCCGGAGAT CGCCGAGCAG GCCGCCTACT ACGGCGACGG GTACTTCCAC
AACAACATCT TCTGGCCCAT CGAGCACACG CAGCAGATGG TCGCGCTGTA CCGCCAGCGC
TTCGAGCACT ACGGCCACGG CACGGCCGAC CAGGCGATCG TCGGGCTCGG CGGCCAGGTG
TTCATGCGCA AGAACTCCCA GGACGCGCGC CGCGAGTTCC GCCCGTACTT CGACAACGCC
CCGGTCTACG GACACGGCCC GTCGATGGAG GACTTCACGG CCCAGACGCC GCTCACCGTC
GGCAGCCCGC AGGAGGTCAT CGACCGCTAC GCCGCCATGC GCGACCACGT GGGCGACTAC
CAGCGCCAGC TGTTCCTCAT GGACCACGCC GGTCTCCCGC TCAAGACCGT CCTCGAGCAG
CTCGACATCC TCGGCGAGGA GGTCGTCCCC GTGCTGCGCA AGGAGCTCGC GGTCGGCCGC
CCCGCGCACG TCCCCGACGC GCCCACCCAC GCGGCACTGG TCGCCAGGGC CGGCGGGGCC
CACGACGCCA CCGTCTACGC CCCGGCCGAC GACGTCACCG GCGCCTCGCC TGTCGGCGCA
CGGTGA
 
Protein sequence
MMQFGIFTVG DVTPDPTTGR TPTENERIKA TIAIARKAEE VGLDVFATGE HHNPPFVPSS 
PTTTLAFIAA QTERILLSTS TTLITTNDPV KIAEDYATLQ HLADGRTDLM MGRGNTGPVY
PWFGKDIRQG INLAIENYAL LHRLWREDVV DWEGKFRTPL QGFTATPRPL DGVPPFVWHG
SIRTPEIAEQ AAYYGDGYFH NNIFWPIEHT QQMVALYRQR FEHYGHGTAD QAIVGLGGQV
FMRKNSQDAR REFRPYFDNA PVYGHGPSME DFTAQTPLTV GSPQEVIDRY AAMRDHVGDY
QRQLFLMDHA GLPLKTVLEQ LDILGEEVVP VLRKELAVGR PAHVPDAPTH AALVARAGGA
HDATVYAPAD DVTGASPVGA R