| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_18560 |
|---|
| Symbol | |
|---|
| ID | 8633491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2064539 |
|---|
| End bp | 2065624 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | predicted transcriptional regulator |
|---|
| Protein accession | YP_003314616 |
|---|
| Protein GI | 269795161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0049611 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0116825 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGCGA ACACCCCACC TGCCGCCAGA CTCCTCAACC TCGTCATCGC GCTGATGAAC
ACGCCGCTGC GCATGTCGAA GGAGGAGATC CGTGGCTCGG TCGCGGGCTA CGACGACGCG
GCGACCACCG AGGCCTTCGA ACGGATGTTC GAGCGCGACA AGGACTCGTT GCGCGCCCTG
GGGGTGCCGA TCGTCACCGT CGACGCAGGC GGTCACGCCC AGGACGCGGG GTACCGGATC
GACAAGGACG CCTACGCGCT CGAGGAGGTC GACCTCACGC CGGCAGAGCT GGGCGTGCTG
TCGCTCGCGG CGCAGTTCTG GCAGGACAGC GCGGTGGCCG TGGACACCTC GCGCGCGCTC
ACCAAGCTGC GCTCGGCGGG GGAGCCGGCC GAGCTGGGGG ACGGCGCGGA CGTGACGGCG
GGGCTGGCCC CGCAGGTGCG GTCGGTGTCC GACGCGTACG AGACGTTGCT CGACGCGGTG
GTCGAGCGTC GTGCGGTGAC CTTCACCTAC CGTGCGGCGA GCACCGGGCA GGTGCTGCAG
CGGACCGTCG AGCCGTGGCG GGTCGTGGTC CGTGACGGCG GGTGGTACCT GCTGGGTCAC
GACCAGGACC GCCGGGCGGC GCGTGCCTTC AAGCTCACCC GGGTCGAGGG CCAGGTGCGG
GCGTCCGGGC CTGCGGGCGC CTTCGAGATC CCGGAGGGTC TCGACGCCGA CGCGCTCATC
GGGCTGCGCC GGCAGGCACC GGTGCGTCCC GCGGTCCTCG CGATCCGTCC GGAGCGCGCC
GGGGCGCTGC GTGCCCGCGG GCGGGCTGCG GGCGAGGGCG AGACGCGGGC CGACAGCAGC
ACGACCACCG TCCCTGCGGG ACGCGACGTG GTCGTGGTGG ACTTCACCTC GGTGCAGACC
GTCGCGGACG AGGTCGCCGG GTACGGTGAC GCGGTCGTGG TGCTCGACCC GCCCGACCTG
CGGGCCGCGG TCGTCGAGCG CCTGCGGGCG GCGTCGTCGC TGGCAGGCGC ACCTGCTCCA
CCGAGCGCAC AGGCTGCACA GACCGCACAC GCTGCACAGA CGACCGAGGG GACCCACCGT
GGCTGA
|
|---|
| Protein sequence | MPANTPPAAR LLNLVIALMN TPLRMSKEEI RGSVAGYDDA ATTEAFERMF ERDKDSLRAL
GVPIVTVDAG GHAQDAGYRI DKDAYALEEV DLTPAELGVL SLAAQFWQDS AVAVDTSRAL
TKLRSAGEPA ELGDGADVTA GLAPQVRSVS DAYETLLDAV VERRAVTFTY RAASTGQVLQ
RTVEPWRVVV RDGGWYLLGH DQDRRAARAF KLTRVEGQVR ASGPAGAFEI PEGLDADALI
GLRRQAPVRP AVLAIRPERA GALRARGRAA GEGETRADSS TTTVPAGRDV VVVDFTSVQT
VADEVAGYGD AVVVLDPPDL RAAVVERLRA ASSLAGAPAP PSAQAAQTAH AAQTTEGTHR
G
|
|---|
| |