| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17870 |
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| Symbol | |
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| ID | 8633423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 1993102 |
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| End bp | 1994289 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003314548 |
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| Protein GI | 269795093 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.092005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.568716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG AGACGACCAC CAGCGCGACC ACTCCCGACA CCAGCGCCGG GGCAGCAGCG
CAGCCGCCCG CCGTCGTGCG CGTCGACGCC GAGCACAGCT ACGACGTGGT CATCGGCAAG
CAGCTCCTCG GCGAGCTGCC CCGCCTGCTC GGCGCGGACG TCAAGAAGGT GCTCGTCGTG
CACACCGAGG CCATGGAGGC CTCGGCCGCC GTGGTCCGCG AAGACCTGCT CGCCCAGGGC
TACGAGGCGC TCCTCGCCGT CATCCCCGAC GCCGAGGGAG CGAAGTCCGT CGATGTCGTG
GCCTTCTGCT GGCAGGTCCT CGGGCAGTCC GACTTCACGC GCAGCGACGC GATCGTCTCG
CTCGGCGGCG GAGCGACCAC CGACGTCGCC GGCTTCATCG CCGCCACCTG GCTGCGGGGC
ATCGCCGTGG TGCACATCCC CACGACGCTG CTCGCCATGG TCGACGCGGC CGTCGGCGGC
AAGACCGGCA TCAACACCGC CGAGGGCAAG AACCTCGTCG GTGCCTTCCA CTCGCCGGTC
GGCGTGCTCT GCGACCTCGT CGCCCTCGAG ACCCTGCCCA AGTGGGACTT CGTGGCCGGG
CTCGGCGAGA TCATCAAGAC CGGGTTCATC GCCGACCCCG TGATCCTCGA CCTCGTCGAG
GCCAACGCCG AGGCCCTCGG TTCTTGGCCC GCGAGCATCG ACGACCATCT CTGGGGCGTC
GTCCGCGAGC TCGTCGAGCG CAGCGTCGCC GTCAAGGCAC GCGTGGTGAG CCAGGACCTC
AAGGAGGCGT CGCTCCGCGA GATCCTCAAC TACGGGCACA CCCTCGCGCA CGCCATCGAG
CAGGTCGAGC GTTTCGCGTG GCGCCACGGT GCCGCCGTGT CCGTCGGGAT GGTCTTCGCG
GCCGAGCTCG CCCGCCTCGC GGGTCGCCTC GACGACGAGG TCGTCGACCG GCACCGCTCC
ATCCTCGCCT CTGTCGGTCT GCCGCTCACC TACCGCGGTG ACCGCTGGGA GCAGCTCCTC
GCCGTGATGC GCCGCGACAA GAAGTCCCGC GGCGACCTGC TCCGCTTCGT CGTCCTCGAG
GACATCGGCA AGGTCGGTCG CCTCGAGGGG CCCGACCCGA CGCTCCTCGC CGCCGCCTAC
GCCGAGATCA GCGCCGACGC CCCGACCAGT CGGGCCGTCT CGCTCTAG
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| Protein sequence | MTDETTTSAT TPDTSAGAAA QPPAVVRVDA EHSYDVVIGK QLLGELPRLL GADVKKVLVV
HTEAMEASAA VVREDLLAQG YEALLAVIPD AEGAKSVDVV AFCWQVLGQS DFTRSDAIVS
LGGGATTDVA GFIAATWLRG IAVVHIPTTL LAMVDAAVGG KTGINTAEGK NLVGAFHSPV
GVLCDLVALE TLPKWDFVAG LGEIIKTGFI ADPVILDLVE ANAEALGSWP ASIDDHLWGV
VRELVERSVA VKARVVSQDL KEASLREILN YGHTLAHAIE QVERFAWRHG AAVSVGMVFA
AELARLAGRL DDEVVDRHRS ILASVGLPLT YRGDRWEQLL AVMRRDKKSR GDLLRFVVLE
DIGKVGRLEG PDPTLLAAAY AEISADAPTS RAVSL
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