| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17730 |
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| Symbol | |
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| ID | 8633409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 1978850 |
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| End bp | 1979704 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003314534 |
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| Protein GI | 269795079 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.38267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.612619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCTC GCGCCGCCGT CCTCGGTCAC CCGATCAGCC ACTCGCTCTC CCCGGTGCTG
CACCGCGCCG CCTACGAGGC GCTCGGCCTC GACGGCTGGG AGTACGAGGC GGTCGACGTG
ACCGAGGAGA CCCTCGCGGG GTTCCTCGAC GGGCTCGACG AGACCTGGGC AGGTCTGAGC
CTGACGATGC CGCTCAAGCA GACGGTCATG CCGATGCTCG ACCACGTCGA CCCGCTGGCC
GTCGTGACGG GCGCGGTGAA CACCGTGGTG TTCCAGGGGA CCGGTACGTC GCGGACCCTC
ATCGGGGCGA ACACCGACGT CTACGGGCTC GTCGCCGCCT TGCGTGAAGG GGGCGCCGGG
GGAGAGGGGC CGACCGGTCG CGGCACCGGC ATCGTCCTCG GCGCCGGGGC GACCGCGTCG
TCGACGCTCG CTGCGCTGGC CGAGCTGGGG ATCACGTCGG TCGACGTGTT CGTCCGCTCC
CTCGGGCGCA CGGGCGACCT GCAGCGCGCC GCGCACCGCA TGGGGCTCGC ACCGCGGTTC
CACCCGATCG CCGGGGCCGC TGAGGCCGCG CTCGGGGCTG ACGTCGTCGT CTCGACCCTC
CCAGCCCACG GCGCGGACGC CGTCGCTGCG GAGCTGGCCG CCTCGGGCCG CACGGTCGAG
GGCGTCCTCA TCGACGTGTC CTACGACCCC CGGGTCACGG CGCTCACCGC CGCGTGGAGC
TCGCTCGACG GTGCCACGGT GCCCGGGCAG CGCATGCTGC TGCACCAGGC CGCCGAGCAG
GTCCGGCTCA TGACCGGGCA CGTGGCGCCC GTGGCGGCGA TGGACGACGC GCTCGAGGCG
GCCCTCGCGG CCTGA
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| Protein sequence | MTSRAAVLGH PISHSLSPVL HRAAYEALGL DGWEYEAVDV TEETLAGFLD GLDETWAGLS
LTMPLKQTVM PMLDHVDPLA VVTGAVNTVV FQGTGTSRTL IGANTDVYGL VAALREGGAG
GEGPTGRGTG IVLGAGATAS STLAALAELG ITSVDVFVRS LGRTGDLQRA AHRMGLAPRF
HPIAGAAEAA LGADVVVSTL PAHGADAVAA ELAASGRTVE GVLIDVSYDP RVTALTAAWS
SLDGATVPGQ RMLLHQAAEQ VRLMTGHVAP VAAMDDALEA ALAA
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