Gene Sked_17460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17460 
Symbol 
ID8633382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1946740 
End bp1947444 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314507 
Protein GI269795052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.602251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.215933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGT CCGAGACCGC GGTGATCGTC ATCGCCGTCG TGCTGGTGCT CGGGTGGCTC 
GTGTGGGTGT CTGCTACCCG CCTCGACCGC TTGCACCGCA AGGTGGTCGC GTCCCGGCTC
GCCCTCGACG CCCAGCTGCT CCGACGGTCC GCCGTCGCGG CCGAGCTCGC GACCTCGGGC
GTGCTCGACC CCGTGAGCTC CGTGCTCCTG CTCGAGGCGA CCCGGGACGC CTCCTCGGGC
TCCTCCGACG GTGAGCGCGA GCTCGCCGTC GCGGTCCCCG ACCTGGAGCC CCTCGTCCGC
GAGCCGCAGG CCGACGGCCG CGCCGGCCGC GGCCCCTCGC GCGGGACCGT CTCCCGGGCG
CTCGAGGGCG ACCTCGGCGA CGAGAGGTCG CAGGCCGAGA GCACCCTGTC GTCGACCCTG
CGTGCCGTGC TCGACGACCC GGCCGAGGTC GAGGACCTCT ACGAGCTCCC CGAGGCCGGG
GTGCTGCTCG ACGACCTCGC GGGTGCCTGG TACCGCGTGC AGCTCGCCCG CCGGTTCCAC
AACGAGGCCG TCGACCAGGC GCAGCGCATG CGGGCCAAGG TCCTCGTGCG TGCGGTCCGC
CTGGCCGGTC GCGCCTCCAT GCCGCAGACG GTCGAGCTCG ACGACACCTG GCCGGTGGCG
CTGCGCCGCC CGCGTGCGAT GCCCGGGGCC ACCGGTGGAG CCTGA
 
Protein sequence
MTWSETAVIV IAVVLVLGWL VWVSATRLDR LHRKVVASRL ALDAQLLRRS AVAAELATSG 
VLDPVSSVLL LEATRDASSG SSDGERELAV AVPDLEPLVR EPQADGRAGR GPSRGTVSRA
LEGDLGDERS QAESTLSSTL RAVLDDPAEV EDLYELPEAG VLLDDLAGAW YRVQLARRFH
NEAVDQAQRM RAKVLVRAVR LAGRASMPQT VELDDTWPVA LRRPRAMPGA TGGA