Gene Sked_17380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17380 
Symbol 
ID8633374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1939630 
End bp1940448 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content76% 
IMG OID 
ProductPredicted membrane-bound metal-dependent hydrolase (DUF457) 
Protein accessionYP_003314499 
Protein GI269795044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.096354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCG CCAGCCACGC CGTCTCGGGC GCTGCCGCCT GGGTCGCGCT CACCTCGACC 
GCTCCGATCG CCCTCGGCAC GCACCCTCTC CCGCCCCAGG GCGTCATCAT CGGAGCGCTC
GTCACCGCCG GCGCCGCCCT GCTGCCCGAC GCCGACCACC ACTCCGCGAC CATCGCACGC
TCGGGCGGCT TCCTCACCCG CGGCCTGGCC GGTGCTGCCG GAGCGGCGTC GGGAGGTCAC
CGCCACGGGC TCCACACGGC GATCGCCGCC GTCGGTGCCG CGCTGCTCAC CGGGCTGGCG
GACCGGCTGA CCGCGACGGT CCCGCTGCTC GGCACGATCC CGCTCGGGTC GGCCCTGGTG
CTGCTGGCCC TGGTCGCCTT CGCGAACAAG GCGCTCGACC TCGGGCGGTC CGGGGTGGTC
AACCTCTGGC TCGGTGCGAC GGTGGTGACC GTGGCCGTGC TCGCCTGGGC GCCGGAGCAG
CTCGAGTGGC TCCCGCAGGC CGTGCTGGTC GGGTTCCTCG TCCACCTCGT CGGCGACCTC
CTCACCACCG GCGGGCTGCC GCTGCTCTGG CCGTTCCTCG TCAGGCCGCC GCGCAGGCTC
CGCAAGGCCC CCGTGCTCCG GCGGGTGTGG CTGCCGAACG GGTACGTCGC GCTGCCGGTG
CTCGGCCGCA CCGGGTCGGC ACGGGAGCAG GCGCTCACCG CCGTCCTCAG CCTCTACGCC
GGTGCGCTGG TCGTCGTCGC GGCCGGGCGG CTCGTCGACG GCATCGGTCG CGGCACCGCC
GGTGCTGCCA GCGCCGCCGG CGTCGCCGGT CTCGGCTGA
 
Protein sequence
MMGASHAVSG AAAWVALTST APIALGTHPL PPQGVIIGAL VTAGAALLPD ADHHSATIAR 
SGGFLTRGLA GAAGAASGGH RHGLHTAIAA VGAALLTGLA DRLTATVPLL GTIPLGSALV
LLALVAFANK ALDLGRSGVV NLWLGATVVT VAVLAWAPEQ LEWLPQAVLV GFLVHLVGDL
LTTGGLPLLW PFLVRPPRRL RKAPVLRRVW LPNGYVALPV LGRTGSAREQ ALTAVLSLYA
GALVVVAAGR LVDGIGRGTA GAASAAGVAG LG