Gene Sked_17340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17340 
Symbol 
ID8633370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1935835 
End bp1936383 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content74% 
IMG OID 
Productconserved protein of DIM6/NTAB family 
Protein accessionYP_003314495 
Protein GI269795040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00967262 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0857306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACTG TCGTCCGGAC CATCACCGGC ACGCTGCCCG GGCAGGACGT CGGCGCCGCG 
TTCCGCGAGG CGATGTCGAC CCTCGCCGGG GGTGTCTGCG TCATCACCAC CGACGACGGA
GGCACGCCGA CCGGGCTGAC GGTCACGACC GGGTTCAGCG TGAGCATGGA CCCGCCGATC
TTCGGCGTGT GCGTCGACAA CACGTCGCGC ACCCTCCCGG CCCTGCTGGC CCGGGGTGCC
TTCGTGGCCA ACGTCCTCGG CGGGCACGCC TCCCGGGTGG CCTCGGCCTT CGCCAGCCGT
GCGGAGGACA AGTTCGCCCC GGAGTCGGGG CCGGTCGCGC GGGCGACCAC GCGTGAGGGG
CTGCCCTGGC TGCCGCGGGA CAGCGTCCGT GCGGTCGCGT GCACCGTGTC CCGGGTCGTC
GAGGCCGGTG ACCACACGCT CGTGCTGGGC CACGTCACCG AGGTGCTGCG GCCCGAGGAG
GAGCACCCGC ACGCGCTCGG CTACCTCGCC CGCACCTTCC ACTCCTTGCC GACCCGCCCG
GCGGCCTGA
 
Protein sequence
MSTVVRTITG TLPGQDVGAA FREAMSTLAG GVCVITTDDG GTPTGLTVTT GFSVSMDPPI 
FGVCVDNTSR TLPALLARGA FVANVLGGHA SRVASAFASR AEDKFAPESG PVARATTREG
LPWLPRDSVR AVACTVSRVV EAGDHTLVLG HVTEVLRPEE EHPHALGYLA RTFHSLPTRP
AA