Gene Sked_17330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17330 
Symbol 
ID8633369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1935265 
End bp1935711 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content71% 
IMG OID 
Productcupin domain-containing protein 
Protein accessionYP_003314494 
Protein GI269795039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.017863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0817952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCG CAGCACCCAT CATCCGCAAG CTCTCCGACA TCCCCGGCTA CCTGATCTCC 
CCCGACGACA CGGTCCGGCT GGCCGAGCTC GCGGGGCCGT CGCACGGGAC GGGCACGAGC
GTGTTCCTCG AGATCTGGGA GCCGGGCGGC GCGCAGCCGC TCAACTCGCA CGAGGACTCG
GCGGAGATCT TCATCGTGCT CTCCGGGCAG GCGGAGGCGC ACAGCGACGC GGACGTGCAC
GAGCTGGTCG CCGGGGACGT GCTGATCCTG CAGCCCGGGT CGGAGCACCG GATCCTCAAC
ACCTCCGCGG ACCAGCGTCT CTACACGATC ACGATCATGG CGAACGACGG CGGCTTCGCG
AGGCTCGTCA CCGACGGGAC CCCGGCCCCG CTGACCGCCG AGGACCTGGG TCACCTGGTG
GCCTCGCTCG CACCGACGGC GGTCTGA
 
Protein sequence
MSGAAPIIRK LSDIPGYLIS PDDTVRLAEL AGPSHGTGTS VFLEIWEPGG AQPLNSHEDS 
AEIFIVLSGQ AEAHSDADVH ELVAGDVLIL QPGSEHRILN TSADQRLYTI TIMANDGGFA
RLVTDGTPAP LTAEDLGHLV ASLAPTAV