Gene Sked_17120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17120 
Symbol 
ID8633348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1912485 
End bp1913198 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative RNA-binding protein 
Protein accessionYP_003314473 
Protein GI269795018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAACG ACGTCAGCGT GCTCGCCGAG CTCGCCCTGC ACATCGCCCG GCTCCCTCCG 
GAGCAGCCGC TGCCGCTGCG CCTGTGCTCT GCCGGCGCGA CGCTCCTCGG CGCCGAGGGC
GGGGCCGTGA CCCTCACCGC GACACCGGGC GCGCCCTACG TGCTGGCCAC CACGGACACC
GTCGCCGAGC GCATCGAGTC GCTCCAAGAG GTCCTGGGCC TGGGCCCGCG GCACGAGGCC
CACCAGACCA GGCGACCGGC GTCGCTCGAC GTCGGAGTCG CCCCGGACGC GCCGTCCTCC
CTGGCCCAGG AGGTCCGCGA GGCGGTCGGT GAGGTGCGTG TCCACTCCTA CCCGATGGTC
GTCTCGGGCT CCGTGCTCGG CGTCTTCAGC GTGCACCTCG CCGCCGGGGT GACGCTGTCG
CGCGACGACG ACGAGGCGAT GGTCGTCGCC GCGATCATCG GCGGGGCGCT GCTGCGCGAC
GTCGACGAGG AGTCGTCGTC GATGCTCAGC GGCTGGCCGG CCCGGGCCAA GATCCACCAG
GCGACCGGCA TGGTGATCGC CCAGCTCAAG GTCTCCCCGG ACGACGCGCT GATCCTCATC
CGCGCACACG CGTACGCTCA GGGGACTACA GTCGCTGCGG TCGCGTCGGC ACTGGTCGAG
CGGCAGCTGG TCTTCAGCCT CGACGACACC TCGACGGGAG ATGACGCACG GTGA
 
Protein sequence
MTNDVSVLAE LALHIARLPP EQPLPLRLCS AGATLLGAEG GAVTLTATPG APYVLATTDT 
VAERIESLQE VLGLGPRHEA HQTRRPASLD VGVAPDAPSS LAQEVREAVG EVRVHSYPMV
VSGSVLGVFS VHLAAGVTLS RDDDEAMVVA AIIGGALLRD VDEESSSMLS GWPARAKIHQ
ATGMVIAQLK VSPDDALILI RAHAYAQGTT VAAVASALVE RQLVFSLDDT STGDDAR