Gene Sked_17090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17090 
Symbol 
ID8633345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1907871 
End bp1908596 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314470 
Protein GI269795015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.6252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG AGAGAGACGA CCTGATGCCC GAGGGACCCC GGGGCCTCAT CGCCCCGTAC 
GTCTTCGACC ACGTCGACGA CCTCGAGCGG CGCCAGGTCG ACCGGCTGGT CGCGACCGAC
GACGACGCAC GACGCGAGCT CGACGAGTTC CGCGAGGTCG TCGCGACCTT CACCGTCGAC
GAGGCACCGC CCGCGTTCCT GCGTGCCCAG GTGCTCGACA CCATCACGCA GCAGCCCCTC
AAGGCTGCTC CGGTCACCCA GACCCGTCAC CGGCCGACCG CGGCCCGACG ACGCTGGGTC
AGCCTCGGCG TGGCGGCGGC GGTCGCCGTC GGCATCGCGG TCCCGACGAG CATCGCCGTG
CAGTCGCACT CCCAGCAGCA GCAGCTGCAG GCCGAGGCAG CCACGGTCGC CCAGATGATC
GCCGACCCCG AGGCCCGCGT GCTGCGGGCA CCGGTCGACG GCGGTGGAGA GGTCAGCGCG
CTGGTCTCCT CCGACCGCGT GTTCGTCTCC ACCAGCGACA TGGAGCAGGC AGCCGCCGAC
AGCGACTACC AGCTCTGGGT GATCGACGCC GACGGCATCA GCTCCGCAGG GCTCATGCGC
CCCGAGGACG GGTCGTCGAC AGCGCTCGTC GAGGCGGGCG CCGGAGCCAC TGTTGCCGTG
ACGATCGAAC CGCGAGGCGG CTCCGAGCAG CCGACCACCG ACCCGATCGT CGCCGTCGAG
ATCTGA
 
Protein sequence
MADERDDLMP EGPRGLIAPY VFDHVDDLER RQVDRLVATD DDARRELDEF REVVATFTVD 
EAPPAFLRAQ VLDTITQQPL KAAPVTQTRH RPTAARRRWV SLGVAAAVAV GIAVPTSIAV
QSHSQQQQLQ AEAATVAQMI ADPEARVLRA PVDGGGEVSA LVSSDRVFVS TSDMEQAAAD
SDYQLWVIDA DGISSAGLMR PEDGSSTALV EAGAGATVAV TIEPRGGSEQ PTTDPIVAVE
I