| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_16630 |
|---|
| Symbol | |
|---|
| ID | 8633299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1862381 |
|---|
| End bp | 1863430 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | theronine dehydrogenase-like Zn-dependent dehydrogenase |
|---|
| Protein accession | YP_003314432 |
|---|
| Protein GI | 269794977 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.160551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCAA CAGTCATCCA CGGCAACCGC GACGTCCGCC TGGAGTCTGT CCCGGACCCC
CAGATCCACC AGCCGACCGA CGCGATCGTC CGCGTCGTCG CCTCCTGCGT CTGCGGCTCC
GACCTGTGGC AGTACCGCGG AGTCAACGAG GTCACCAAGC CCAGCCGCAT CGGGCACGAG
TTCGTCGGCG TCGTCGAGGA GGTCGGGCCC GAGGTCCGCC ACGTCCGCCC CGGCCAGTTC
GTCGTTGCCC CCTTCTCCAT CTGCGACAAC ACCTGCGTGC ACTGCCAGAA CGGCATCCAC
ACCTCGTGCA CCAACCTCGC GTGGTGGGGC TCGACCGACC AGGGCGGCGA CCCGACGGAC
GGCGGCCAGG GGGAGTACGT GCGCGTCCCC ATGGCCGACG GCACGCTCGT CGTGACGCCC
GAGCACCCCT CCGACGAGCT GCTGCCGAGC GTGCTCGCGC TCGCGGACGT GTTCGGCACC
GGCCACCACG CGGCCGTCAG CGCCGGCGTG CAGGCCGGGT CGACCGTCGC GGTCATCGGT
GACGGCGCCG TCGGCCTGTC GGCCGTGCTC GCGGCGCAGC GGCTCGGCGC CGGACGCATC
ATCGCCATGT CCCGCCACGA GTCACGCCAG GTGGTGGCCA CCGAGTTCGG GGCGACCGAC
ATCGTCGCGG CCCGCGGCGC CGACGGCGTC GCGGCCCTCA TGGAGCTCAC CGACGGCGTG
GGGGTCGACT GCGCGCTCGA GTGCGTGGGC ACCAAGGAGT CCATGCAGCA GGCGCTCGAC
TCCGCCCGCC CCGGCGGCAA GGTCGGCTTC GTGGGTGTCC CCGCGGGCGG GCCCGAGCTG
CCGGTCCGCC AGATGTTCTC CTCGAACGTC GGTGTCAACG GTGGCGTCGC CCCGGTGCGC
GGGTACATCC CCGAGCTCAT GGCCGACGTC TACGCCGGGA CGGTGAACCC GGGACGCGTG
TTCGACCTGA CGCTCCCGCT CGCCGAGGTC GCCGAGGCCT ACGCCGCCAT GGACGAGCGC
CGCGCCATCA AGTCGATGCT GCGGCCCTGA
|
|---|
| Protein sequence | MRATVIHGNR DVRLESVPDP QIHQPTDAIV RVVASCVCGS DLWQYRGVNE VTKPSRIGHE
FVGVVEEVGP EVRHVRPGQF VVAPFSICDN TCVHCQNGIH TSCTNLAWWG STDQGGDPTD
GGQGEYVRVP MADGTLVVTP EHPSDELLPS VLALADVFGT GHHAAVSAGV QAGSTVAVIG
DGAVGLSAVL AAQRLGAGRI IAMSRHESRQ VVATEFGATD IVAARGADGV AALMELTDGV
GVDCALECVG TKESMQQALD SARPGGKVGF VGVPAGGPEL PVRQMFSSNV GVNGGVAPVR
GYIPELMADV YAGTVNPGRV FDLTLPLAEV AEAYAAMDER RAIKSMLRP
|
|---|
| |