Gene Sked_16550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16550 
Symbol 
ID8633291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1856762 
End bp1857376 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content73% 
IMG OID 
Productpredicted transcriptional regulator 
Protein accessionYP_003314424 
Protein GI269794969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.45133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGG CACGTGAGAC GTCAGCGGGG CACGCGCCGT CGGACGACGC GGACACGGTG 
GCCATGCTCG GCGCGACGGT GCGTGCGGCG CGCAAGCAGC TCGACCTGTC GGTCCAGGCG
CTAGCGCAGC GCGCGGGTGT GAGCCTGGGG CTCGTGAGCC AGCTCGAGCG CGGCCTCGGC
AACCCGTCGC TGCACTCGAT CCAGCGGCTG GCCTCCGCGC TCGGGGTCTC GGTGACACGC
CTCCTCGAGC CGCCCGCCGA GGAGCTCGTC GTGGTGCGTG CCGGTCGACC GCACGTCCTC
CCGCTCGCCC CGGGGACCCC GGACGACGGC CAGGCCGTCC GCGAGCTGCT CTCCCCGCGC
GGGGAGACGG CGATCCAGCT GATCCGGACC ACCCTGCCGC CCGCCTTCAC CAACGTCGAG
CGACCGTTCC GGCACCTGGG GACGGAGACC GTCACCGTGC TGAGCGGGGT CCTGCACATC
ACCCACGGTG ACCGGGAGAT CGAGCTCGGC GCAGGCGACA CCGCGACCTA CGGGTGCTCC
ACCCCGCACT GGTGGGCCAA CGGGCACGAC GGCGAGACGG TGGTCCTCGG AGCCGTCGCA
CCGTCCGAAC GCTGA
 
Protein sequence
MTEARETSAG HAPSDDADTV AMLGATVRAA RKQLDLSVQA LAQRAGVSLG LVSQLERGLG 
NPSLHSIQRL ASALGVSVTR LLEPPAEELV VVRAGRPHVL PLAPGTPDDG QAVRELLSPR
GETAIQLIRT TLPPAFTNVE RPFRHLGTET VTVLSGVLHI THGDREIELG AGDTATYGCS
TPHWWANGHD GETVVLGAVA PSER