Gene Sked_16300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16300 
Symbol 
ID8633266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1827320 
End bp1828033 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content76% 
IMG OID 
ProductNTP pyrophosphohydrolase 
Protein accessionYP_003314399 
Protein GI269794944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCACC TGCCACAGCC CTCGACCTCG GTGCGGGGAG CGCTCGACGC GCTCGTCCGC 
ACCGGGGTCG ACTGGGGCTG GCGCACCGGG CCCGTGCCCG GTGCGCGCAC ACCGCTGCCC
GAGCGAGAGC GGCCCGCCAC GACCCGGCCG GCCGCAGTCC TCGTGCTGCT CGGCGAGAGC
GAGGGTCTCG GCGGTGGTCT TGGGCGCGCA CCAGCCCCCG CCGGCCTCGA CGTCCTGCTC
GTCCAGCGAG CCGCGTCGCT CAACCACCAC CCGGGCCAGA TCGCCTTCCC CGGCGGTCGA
CTCGACCCCG AGGACGACGG TCCCGTCGGC GCCGCGCTGC GCGAGGCGGT CGAGGAGACC
GGGCTCGACC CGACCGGGGT CGACGTCGTG GGCACTCTCG GCGGCCTCCC GCTCCCCGTG
AGCAACCACG TGGTCACCCC GGTGCTCGCC TGGTGGGCCC GACCGACCCC TGTCGGCGTC
GTCGACGCCG GGGAGTCAGC CGCTGTGTTC CGCATCGCCG TCACCGACCT GCTCGACCCC
GCCAACCGCC GCCTGGCACG GGTGAGCCGC GCGGGCCGCT CTCTCGACAG CCCGGCGTTC
CTGGTCGACG ACCGGCTGGT CTGGGGCTTC ACCGGCATCG TGCTGGACCG CGTGCTCGAC
GGGCTCGGGT GGACCCGCCC GTGGGAGCCG CAGGTGCTCG ACATCCCGGT CTGA
 
Protein sequence
MTHLPQPSTS VRGALDALVR TGVDWGWRTG PVPGARTPLP ERERPATTRP AAVLVLLGES 
EGLGGGLGRA PAPAGLDVLL VQRAASLNHH PGQIAFPGGR LDPEDDGPVG AALREAVEET
GLDPTGVDVV GTLGGLPLPV SNHVVTPVLA WWARPTPVGV VDAGESAAVF RIAVTDLLDP
ANRRLARVSR AGRSLDSPAF LVDDRLVWGF TGIVLDRVLD GLGWTRPWEP QVLDIPV