Gene Sked_15950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15950 
Symbol 
ID8633231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1783805 
End bp1784911 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content77% 
IMG OID 
ProductABC-type cobalt transport system, permease component CbiQ 
Protein accessionYP_003314364 
Protein GI269794909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.277345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.332753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG CTGGTCAGGT CCACCCGGTC GCCTGGTGGG TGTGGGGACT GTGCGTCGCG 
GCCGCTGCCA CGACCACCAC CCACCCGGTG GTCCTCGCGG TCCTGGGGAG CGCGCTGCTC
GCCGTCGTGG CGTCGTGCGC CGACCCGGCC CGACGGCGCT CGACCTTCCG CACCTACCTG
TGGGTCGCCG CCTGGACGGT CGCGGTCCGT CTGGCGTTCC GGGTGGTCTT CCCGACGGGC
TCGGGGCAGG GTGTCCTCAC CCTGCCCGAG CTGAGCGTGG GACCGGTCGT GCTCTTCGGG
GTCGTGAGCC GAGAGGCTCT GCTCAGCGGT CTGACGGGTG GGCTCCAGCT GGCCGTCGTC
ATCCTGGCGG TCGGGGCCGC CCACACCCTC GCCGACGCCC TGGGGCTCCT GCGGCACGCT
CCGTCCTCGC TCGCCGGGAT CACGACGGCC CTGGTGGTCG CGGTCTCGGT GCTGCCGGCC
CTCGGGCGCG CGGTCCTCGA CGTCCGTCGG GCGGCCCGCC TGCGGGGTCG GCGCCCGGGC
CTGCGCCGGA CGGTCGTGCC GGTCCTCGAG GCGACGATGG AGCGCTCTCT CACGCTCGCG
GCGGCGATGG AGTCCCGCGG GTACGGGGCG ACCCCGGCCG CCGACCAGCC GCTGGTCGCG
TCGGCGCGCC CTCGGCTGGT CCAGCCGCTC GCGTTGCTCG GCGCGGTGGC GGCGGTCGCC
CTCGCGACCT ACGCGCTCTT CGACGCGTCC TGGCCCGGCT GGGGCGCGCC CGTGCTCGCG
GGCCTGGCGG TGCTGCTCTG CGTCGTCGCC CTGAGGACCG GGACGACGCT GCGCCGGACC
GTCTACCGTG CAGAGCGGTG GACACCACGG TCGGTGGTGG TCGCCGCCTC CGGGGCCGGC
AGCCTCCTGC TGCTCGCGAC GGCCGTGTCG CCGCGTGTCG CGCACCCCGG GCCCGCCCTG
GTGCCCGACC TCTCCGTGAC GGCCCTCGTG GCCGCGCTGC TCGTCGCGGT CCCGCTCGTG
GCAGCAGGTG CGGTGGGAGC ACGAGCCGAC GGAGGACAGC GGGCCCGCGG GACGGACCAC
GACGAGCCCG CGGAGGCCCA CGCATGA
 
Protein sequence
MTGAGQVHPV AWWVWGLCVA AAATTTTHPV VLAVLGSALL AVVASCADPA RRRSTFRTYL 
WVAAWTVAVR LAFRVVFPTG SGQGVLTLPE LSVGPVVLFG VVSREALLSG LTGGLQLAVV
ILAVGAAHTL ADALGLLRHA PSSLAGITTA LVVAVSVLPA LGRAVLDVRR AARLRGRRPG
LRRTVVPVLE ATMERSLTLA AAMESRGYGA TPAADQPLVA SARPRLVQPL ALLGAVAAVA
LATYALFDAS WPGWGAPVLA GLAVLLCVVA LRTGTTLRRT VYRAERWTPR SVVVAASGAG
SLLLLATAVS PRVAHPGPAL VPDLSVTALV AALLVAVPLV AAGAVGARAD GGQRARGTDH
DEPAEAHA