Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_15860 |
Symbol | |
ID | 8633222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1773638 |
End bp | 1774792 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003314355 |
Protein GI | 269794900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.175693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.143456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTTCA CACTTCGGGT CGACGAGCCC CGCGAGCTGC TCGCCCTCGT CCCCTTCCAG CTCGGCTTCC ACCCCACCGA GAGCGTCGTC CTGGTGAGCC TGCGGCACCC GCACGGGCAG GTCGGGCTCG TGGCGCGGGC CGACCTCGCA GACCTCGCCG ACCGCGACGT CGGTCGCGCC GTGGCCGACC GGCTGGTGGG TCACCTGCTG TCCGACGGAG CATCCGCCAC GGTCATGGTC GTCTACACCG GCGAGACCGT CGCCCGGCGA CCAGACCCGC TCTGCGACGT GTGGCGCGTC CGCCGCACGG TCCAGGAGGC GGCCGGTGCT CTTCGGCTCT CCGGGACCTG GGTTGTCCAG CCCACCGGGT ACCGCCGGCT CGGCTGCCTC GACCTCGGGT GCTGCCCGCC CGAGGGGCGG TCTCTCGACG AGCTCGGTTC CACCCAGGTA GGAGCGCACA TGGTCCTCGC GGGCGCCTCG GTCAGCGCGT CGCGGGACAC GCTCGCGCAC GTCCCGTCGG CGGACGAGGC AGACCTGCGC CGGTCGCGGG CGGCGGGGGT GGCGTGGACA CGCGCCCGGG CCGCCGACGG CCTGCGAGGA CCGGCGCACG TCGACTGGCT CGAGCGCAGC CTGGCCCTCT GGCGGCTCGC TGTCGAGGGG CGAGCGACCG CTGCCGAGCT GGGGCAGCTC GGTGCGGCGC TCGAGGACGT GGTGCTCCGG GACGCCGTGC TCCTCTCCTT CGTGCCCGGG GCGGACAGCC TCCCCGAGGA CCTGGTGCGG TCCGTGGGTG CTGGCGGTCC GTCCAGCAAC CAGAGCGCCG GGAGTGCCGA CGGTGCTGGT GGTGCCGACA GCACGGGCGT GGCCGTCGGC GACGCGGTCG CGTCGATCAT CGACCCGGGG GTGGGCGTGC GACCTGGAGA CGACGCCGAG CGTGCGAGAC GCGCCCTCGA GCGGGTCGTC GCCCACCGGG ACGACCCGAG CGCCCCCGCG AGGACGCTGC TCGCGCTCAT CGCCTGGTGG GGTGGCGACT CGGCGCTGGC CCGGGCGCAC CTCGAGCGGG GGGACGCCCG TGCCCGCTAC AGGCTCGCGC AGCTGCTGCG CCGCGCCGTC GACGCAGGCC TGCCTCCGGG CTGGGCCGCG GCCGGGGCGG CATGA
|
Protein sequence | MSFTLRVDEP RELLALVPFQ LGFHPTESVV LVSLRHPHGQ VGLVARADLA DLADRDVGRA VADRLVGHLL SDGASATVMV VYTGETVARR PDPLCDVWRV RRTVQEAAGA LRLSGTWVVQ PTGYRRLGCL DLGCCPPEGR SLDELGSTQV GAHMVLAGAS VSASRDTLAH VPSADEADLR RSRAAGVAWT RARAADGLRG PAHVDWLERS LALWRLAVEG RATAAELGQL GAALEDVVLR DAVLLSFVPG ADSLPEDLVR SVGAGGPSSN QSAGSADGAG GADSTGVAVG DAVASIIDPG VGVRPGDDAE RARRALERVV AHRDDPSAPA RTLLALIAWW GGDSALARAH LERGDARARY RLAQLLRRAV DAGLPPGWAA AGAA
|
| |