Gene Sked_15860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15860 
Symbol 
ID8633222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1773638 
End bp1774792 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314355 
Protein GI269794900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.175693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.143456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA CACTTCGGGT CGACGAGCCC CGCGAGCTGC TCGCCCTCGT CCCCTTCCAG 
CTCGGCTTCC ACCCCACCGA GAGCGTCGTC CTGGTGAGCC TGCGGCACCC GCACGGGCAG
GTCGGGCTCG TGGCGCGGGC CGACCTCGCA GACCTCGCCG ACCGCGACGT CGGTCGCGCC
GTGGCCGACC GGCTGGTGGG TCACCTGCTG TCCGACGGAG CATCCGCCAC GGTCATGGTC
GTCTACACCG GCGAGACCGT CGCCCGGCGA CCAGACCCGC TCTGCGACGT GTGGCGCGTC
CGCCGCACGG TCCAGGAGGC GGCCGGTGCT CTTCGGCTCT CCGGGACCTG GGTTGTCCAG
CCCACCGGGT ACCGCCGGCT CGGCTGCCTC GACCTCGGGT GCTGCCCGCC CGAGGGGCGG
TCTCTCGACG AGCTCGGTTC CACCCAGGTA GGAGCGCACA TGGTCCTCGC GGGCGCCTCG
GTCAGCGCGT CGCGGGACAC GCTCGCGCAC GTCCCGTCGG CGGACGAGGC AGACCTGCGC
CGGTCGCGGG CGGCGGGGGT GGCGTGGACA CGCGCCCGGG CCGCCGACGG CCTGCGAGGA
CCGGCGCACG TCGACTGGCT CGAGCGCAGC CTGGCCCTCT GGCGGCTCGC TGTCGAGGGG
CGAGCGACCG CTGCCGAGCT GGGGCAGCTC GGTGCGGCGC TCGAGGACGT GGTGCTCCGG
GACGCCGTGC TCCTCTCCTT CGTGCCCGGG GCGGACAGCC TCCCCGAGGA CCTGGTGCGG
TCCGTGGGTG CTGGCGGTCC GTCCAGCAAC CAGAGCGCCG GGAGTGCCGA CGGTGCTGGT
GGTGCCGACA GCACGGGCGT GGCCGTCGGC GACGCGGTCG CGTCGATCAT CGACCCGGGG
GTGGGCGTGC GACCTGGAGA CGACGCCGAG CGTGCGAGAC GCGCCCTCGA GCGGGTCGTC
GCCCACCGGG ACGACCCGAG CGCCCCCGCG AGGACGCTGC TCGCGCTCAT CGCCTGGTGG
GGTGGCGACT CGGCGCTGGC CCGGGCGCAC CTCGAGCGGG GGGACGCCCG TGCCCGCTAC
AGGCTCGCGC AGCTGCTGCG CCGCGCCGTC GACGCAGGCC TGCCTCCGGG CTGGGCCGCG
GCCGGGGCGG CATGA
 
Protein sequence
MSFTLRVDEP RELLALVPFQ LGFHPTESVV LVSLRHPHGQ VGLVARADLA DLADRDVGRA 
VADRLVGHLL SDGASATVMV VYTGETVARR PDPLCDVWRV RRTVQEAAGA LRLSGTWVVQ
PTGYRRLGCL DLGCCPPEGR SLDELGSTQV GAHMVLAGAS VSASRDTLAH VPSADEADLR
RSRAAGVAWT RARAADGLRG PAHVDWLERS LALWRLAVEG RATAAELGQL GAALEDVVLR
DAVLLSFVPG ADSLPEDLVR SVGAGGPSSN QSAGSADGAG GADSTGVAVG DAVASIIDPG
VGVRPGDDAE RARRALERVV AHRDDPSAPA RTLLALIAWW GGDSALARAH LERGDARARY
RLAQLLRRAV DAGLPPGWAA AGAA