Gene Sked_14390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14390 
Symbol 
ID8633075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1618764 
End bp1619315 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003314209 
Protein GI269794754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGAT GGTCCCCCGA CGCCGCCCTC GTCCTCGAAG AAGCCGCCAT GGCCTTGTTC 
GCCGAGCACG GCTACGCAGA GACGACGGTC CCGCAGATCG CCGAGCGCGC CGGGCTGACC
ACCCGGACGT TCTTCAGGCA CTTCACCGAG AAGCGGGAGG TCGTCTTCCT CCGCGACCGG
GAGCTCCCGA CCGCGGTGCT CACGATCCTC GACGCCCTCC CCCCAGGCCT GAGCACGCGG
CAGCTCGTCG AGCAGGGACT GAGCCGGGCT GCGGTCGAGC TCGAGCAGTG GCGTGCGCCG
ATCAGCCGAC GGGACGCGAT CATCCGGACC GACGAGCACC TGCGCGAGCG GGAGCTCCTC
AAGCTCGACC ACCTCGCGGC CGCGGTCGAG CAGGGACTCG TGGCGCGACA GGTCCCGACG
GCAGAGGCGC ACGTGGCCTC GAAGGTCGCC GCGCTCGCCT TCGACCTCGC CCTGCGGCGG
TGGCTGGATG CTGAGGGATC GTCGCTCCAG GACGAGCTCG ACCGCGCCTG GTCCGCCCTC
CGTCAGGTGT AG
 
Protein sequence
MPRWSPDAAL VLEEAAMALF AEHGYAETTV PQIAERAGLT TRTFFRHFTE KREVVFLRDR 
ELPTAVLTIL DALPPGLSTR QLVEQGLSRA AVELEQWRAP ISRRDAIIRT DEHLRERELL
KLDHLAAAVE QGLVARQVPT AEAHVASKVA ALAFDLALRR WLDAEGSSLQ DELDRAWSAL
RQV