Gene Sked_14340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14340 
Symbol 
ID8633070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1614934 
End bp1615833 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content69% 
IMG OID 
Productaldo/keto reductase, diketogulonate reductase 
Protein accessionYP_003314204 
Protein GI269794749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.414164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA CATCGATCCC CACCCTGACC CTGAACAACG GCGTCACCAT GCCCGCCCTC 
GGCTACGGCG TCTTCCAGAC CTCTCCCGAG GAGACCCGCA CCGCGGTGCA GACGGCGCTC
GAGGTCGGCT ACCGCCACGT CGACACCGCC GCCGCGTACG GCAACGAGCG CGAGGTGGGC
GAGGCGATCC ACCAGTCCGG CCTGGCCCGT GACGAGGTCT TCGTCGAGAC GAAGGTCTGG
ATCAGCGACT ACGGCACCGA GGCGACGCTG CTCGCCTTCG ACAAGAGCGC AGGCAAGCTC
GGCATCGATC AGGTCGACCT GCTGATCCTG CACCAGCCGC TCACCACGCA GTTCGACCTC
ACCATCGACG CCTACCGATC CCTCGAGACC CTCCTCGAGG CGGGCAAGGT CCGGGCCATC
GGTGTCAGCA ACTTCATGGA GCGTGACCTC ACCGCCCTCC TCGAGGCGAC GACGGTGGTC
CCGGCCGTCA ACCAGATCGA GGTGCACCCG TACTTCAGCC AGCCCGGCGT GCGCGCCCTC
GGCGAGCAGC ACGGGATCGT CACACAGGCC TGGTCCCCCA TCGGCGGCAT CACCTTCTAC
CCCGGCTGGG GCGACGAGCG CCGCAGCACC CTGAAGGACC CGACGATGAC TGAGATCGCT
GCGGCGCACG GCGTCACGCC CGCCCAGGTG ATGCTCGGCT GGCACCTGCA GCAGGGCCGC
TCGGCGATCC CCAAGTCGGT CACGCCGCAC CGCATCACCG AGAACTTCGC GGTCGCCGAC
CTCGTGCTCA CCGCAGCCGA GCTCGCGGCC GTCGACGCCC TCGACACCGG CGAGCGCGGC
GGACCCGACC CGGCGACGAT GACGCTCGAG ACCTACGGAC GCGACATCCC GGAGGCCTGA
 
Protein sequence
MAQTSIPTLT LNNGVTMPAL GYGVFQTSPE ETRTAVQTAL EVGYRHVDTA AAYGNEREVG 
EAIHQSGLAR DEVFVETKVW ISDYGTEATL LAFDKSAGKL GIDQVDLLIL HQPLTTQFDL
TIDAYRSLET LLEAGKVRAI GVSNFMERDL TALLEATTVV PAVNQIEVHP YFSQPGVRAL
GEQHGIVTQA WSPIGGITFY PGWGDERRST LKDPTMTEIA AAHGVTPAQV MLGWHLQQGR
SAIPKSVTPH RITENFAVAD LVLTAAELAA VDALDTGERG GPDPATMTLE TYGRDIPEA