| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_14240 |
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| Symbol | |
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| ID | 8633060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1598814 |
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| End bp | 1601099 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003314194 |
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| Protein GI | 269794739 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.674959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCC ACCTCCACGA CATCGACGAC GCCGTCTGGA TCACCCACCC CGCCTGGGCG
GACGGCACCC CACCGCTGCA GGCGCCCGTG CTGCGCTGGT CGGGGTCGGT CGGCTCCCCC
GTCCGTGCCG CACGGCTCAC CGTCGCCGGC CTCGGCGTCT GGGAGGCGCG GGTCAACGGG
GCACCGTCGT CGGCCGACGT GCTCGAGCCC GGCGTCTCCG AGACCCGCAC ACGGGTGGCG
ACCGTCAGCC ACGACGTCAC GTCGCTCCTG CGGGAGGGCG TCAACGAGCT CGTGGTCGAG
CTCGGCGAGG GACCCTCGCA CGTCCGGGAG GTCGAGGGCC GCTACACCAA GTTCGTCGGG
CTGCGGGTGG CTCCGCGAGC GCGCGTCGCG CTCGTCGTCG AGACCGCCGA CGGCCGCACC
GAGCGCCACG TCTCCGGGCC GCGCTGGGGT GCGATGCTCG GGCCGACGAC GCTGAGCCAC
TGGTACGGCG GCGAGGACTA CGACGCACGC CTCGATCCTG CGGGCTGGCA CACGGCGGAC
AGCACGCCCG ACGCTGGGTG GGAGCCGGCA GCCGTGGTCG GCGGGCCGCA GGACGGCCCT
CGGCCGTGGG AGCGGCAGGC ACCGCCGATG CGCGTCGTCG ACGTCGTCGA GGAACGCACC
CGCCTCCCGC TGCCCGACGG TGCGACCGTG GACCTGGGGC GCAACCTCGC CGGTCGCCAG
GTGCTGCGGC TCGGACCGGG CTTCCCCGCG GGCGCGCGGG TCGAGATGTT CCCCGCGGAG
TACGTGCACG ACGACGGCCG TGCCGACCAG AGCAGCACGG GTCGCACCAT CGTGGACCGC
TACACGGCGG CCGGTGGCGC GGCGACGTGG CGACCACGCT TCTGCTACCA CGGCTTCCGG
TACCTCCAGC TGCGCGTGGT CGCGGCAGAC GGCACAGTGC TGCCGACCGA CGACGTGCAC
GTGAGCGCCG AGCAGATCAT GACCGACGAC CCGGTGGTCG GCGGGTTCGC CACCTCGGAC
GCGACCCTCC AAGGGGTCTA CGACCTCGTG GTGCGAGCGG CCGAGTCGAA CCTCTACAGC
GTGCCGACCG ACTGCCCGCA CCGCGAGAAG CTCGGCTGGC TCGAGCAGCT CGACCAGGTG
TTCGAGCCGG TCTCCGCGCG GTTCGACGTG TCCGCGCACT ACGCCGACAT GATCACGCAC
ATGCTGGACT CCCAGACCCT TGACGGGCTG ATCCCCGACA TCGCCCCCGA GCTCGTGGTC
TTCGAGGACG GTTTCCGCGA CGACGTCAGC TGGGGCGGGG TCGTCTGGCA CCTCCCCCGG
CACCTGCACC GCCAGTATGG CGACCTCGCC CCGGCCCGGC AGGCCTGGGA CGCGGGCGTG
CGGTACCTCG ACTACGTCGA GCGGTCTGCG GGCGGTGGCC TGCTGGACCA CGGTCTCGGC
GACTGGATCA CCCTCGACGA CAGCACCCCG CGTCCGCTCG TCGCGACCTA CGGGTGGGTG
CGGATGCTCG ACAGCGCCAC CGAGGTGGCC GAGGCGCTCG GGAGGAGCGA GGACGCCGCG
CGGTTCCGGG GACGGGCTGG CGAGCTGCGC GCGATGCTCG AGGAGGAGTA CGTGTCCGGT
GACGGCGGCG ACCTCGTCGT CGGGTCCGGC AGCCAGGCCA GCCTGGCGCT GCTCGTCGAC
CTCGGGGCGC TCGGCGCCGC TCGCCGTGAG GCTGCCGGCC AGCAGCTCGT CGCCCGCATC
CACGAGGCCG GTGACCGCAT CACCGTCGGG GAGATCGGCC TCGCGGCGCT GCAGCGGGTG
CTCGTCGAGC GCGGCGAGCA CGAGCTCCTG CGCACCGTGT ACACCCGGCT CGACGTCCCC
AGCTACGGCA CGATGCTCGC CGCCGGCGAG ACGACGCTGC ACGAGCACTG GACGGGACGC
GCGACCGACG GCTCCGCGAA CCACTTCATG CTCGGGTACG TGGCGCACTG GCTGACCGGG
TCCGTGGCCG GCCTGCGGCA GGACGTCGGG AGCGTCGCGT GGGAGCGCGC GCTGGTCGCC
CCGGCGCCGG TCGAGGGGGT GGAGTCGGCA TCGACGCACC ATGACAGCCC GGCGGGGAGG
TACAGCGTGG CGTGGCGACG GGACGAGGAG GGGCTCGTGT TGCGGGTGGT CGTCCCGGCC
GCCGGCTCGG CGCGGCTCGT CCTGCCGGAC GGGTTCGACC CGGCCACGAC GGGCGAGGTG
TCGGTGCGCG ACCTCGGGCC CGGGACCCAC GTCCGCCGGC TCGTCGAGCG GCCCGGCGTC
GTCTAG
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| Protein sequence | MHPHLHDIDD AVWITHPAWA DGTPPLQAPV LRWSGSVGSP VRAARLTVAG LGVWEARVNG
APSSADVLEP GVSETRTRVA TVSHDVTSLL REGVNELVVE LGEGPSHVRE VEGRYTKFVG
LRVAPRARVA LVVETADGRT ERHVSGPRWG AMLGPTTLSH WYGGEDYDAR LDPAGWHTAD
STPDAGWEPA AVVGGPQDGP RPWERQAPPM RVVDVVEERT RLPLPDGATV DLGRNLAGRQ
VLRLGPGFPA GARVEMFPAE YVHDDGRADQ SSTGRTIVDR YTAAGGAATW RPRFCYHGFR
YLQLRVVAAD GTVLPTDDVH VSAEQIMTDD PVVGGFATSD ATLQGVYDLV VRAAESNLYS
VPTDCPHREK LGWLEQLDQV FEPVSARFDV SAHYADMITH MLDSQTLDGL IPDIAPELVV
FEDGFRDDVS WGGVVWHLPR HLHRQYGDLA PARQAWDAGV RYLDYVERSA GGGLLDHGLG
DWITLDDSTP RPLVATYGWV RMLDSATEVA EALGRSEDAA RFRGRAGELR AMLEEEYVSG
DGGDLVVGSG SQASLALLVD LGALGAARRE AAGQQLVARI HEAGDRITVG EIGLAALQRV
LVERGEHELL RTVYTRLDVP SYGTMLAAGE TTLHEHWTGR ATDGSANHFM LGYVAHWLTG
SVAGLRQDVG SVAWERALVA PAPVEGVESA STHHDSPAGR YSVAWRRDEE GLVLRVVVPA
AGSARLVLPD GFDPATTGEV SVRDLGPGTH VRRLVERPGV V
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