Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_13960 |
Symbol | |
ID | 8633032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 1572798 |
End bp | 1573553 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | lysophospholipase |
Protein accession | YP_003314170 |
Protein GI | 269794715 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.446365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGT CCGTCGCCGA GCCGTCCCGC CCGACCCCGG TGGTGCTCGT CCCGGGGTTC TCGGGTGGCG GCGCGGAGTA CGCCTTCGTG CAGCCGATGC TGGCGCGGCG CGGGCCTGCG GTCGTGGTCG ACCTGGAGGG TGCGGACCCT GCTGACCTCG CAGCGCTGGT CGAGCGCGTC GCGGGAGTGG TGCGCGCCCA GGCTGGCCCG GTCGTCCTCG TCGGCGCGTC TTCCGGGGCG CTCGTGGCGA CCGCGGTCGC TGCGGCCGAG CCGAGGGTGC GCGGTCTCGT GCTGCTCGGC GGGTGGGTGG CGCCCGACGC GCGGCTGCGC GAAGGTCTCG ACCTGCTGCT CGCCGTCGGC GAGCGGTCGC CCGAGCTCCT GCCCGCCCTC GCACGGCTGC TGCTGCTCAG CCCGTCGGCG ACGACGGCGC CAGGCGCACC GCTGCTGGCC GCCGACCCGT CGGCCACGGC GCGCCTCGCC GCCACCCGCT CCCTCGACGT CTCGGGCGCT GCGGAGGCGG CACCGGGCAC CGATGCCTGG ACCACGCCCA CGCTCGTGGT GGCCGGCAGC GCCGACGCGC TCGTCTCCCC CGCGCTCACG CAGGAGCTCG TCGGGTCCTT CGACGACGTC CGGTACGCGG TGCTCGACGC CGGGCACGCG CTGCTCGCCG AGCGACCCGC GGAGGTGCTC GCGCTCGTCG AGGCTTTCGT GGACGGTCGT GTGGACCCCG GGGCCGTCCC GACGGTGCAG GTATGA
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Protein sequence | MTSSVAEPSR PTPVVLVPGF SGGGAEYAFV QPMLARRGPA VVVDLEGADP ADLAALVERV AGVVRAQAGP VVLVGASSGA LVATAVAAAE PRVRGLVLLG GWVAPDARLR EGLDLLLAVG ERSPELLPAL ARLLLLSPSA TTAPGAPLLA ADPSATARLA ATRSLDVSGA AEAAPGTDAW TTPTLVVAGS ADALVSPALT QELVGSFDDV RYAVLDAGHA LLAERPAEVL ALVEAFVDGR VDPGAVPTVQ V
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