Gene Sked_13960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13960 
Symbol 
ID8633032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1572798 
End bp1573553 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content77% 
IMG OID 
Productlysophospholipase 
Protein accessionYP_003314170 
Protein GI269794715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.446365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGT CCGTCGCCGA GCCGTCCCGC CCGACCCCGG TGGTGCTCGT CCCGGGGTTC 
TCGGGTGGCG GCGCGGAGTA CGCCTTCGTG CAGCCGATGC TGGCGCGGCG CGGGCCTGCG
GTCGTGGTCG ACCTGGAGGG TGCGGACCCT GCTGACCTCG CAGCGCTGGT CGAGCGCGTC
GCGGGAGTGG TGCGCGCCCA GGCTGGCCCG GTCGTCCTCG TCGGCGCGTC TTCCGGGGCG
CTCGTGGCGA CCGCGGTCGC TGCGGCCGAG CCGAGGGTGC GCGGTCTCGT GCTGCTCGGC
GGGTGGGTGG CGCCCGACGC GCGGCTGCGC GAAGGTCTCG ACCTGCTGCT CGCCGTCGGC
GAGCGGTCGC CCGAGCTCCT GCCCGCCCTC GCACGGCTGC TGCTGCTCAG CCCGTCGGCG
ACGACGGCGC CAGGCGCACC GCTGCTGGCC GCCGACCCGT CGGCCACGGC GCGCCTCGCC
GCCACCCGCT CCCTCGACGT CTCGGGCGCT GCGGAGGCGG CACCGGGCAC CGATGCCTGG
ACCACGCCCA CGCTCGTGGT GGCCGGCAGC GCCGACGCGC TCGTCTCCCC CGCGCTCACG
CAGGAGCTCG TCGGGTCCTT CGACGACGTC CGGTACGCGG TGCTCGACGC CGGGCACGCG
CTGCTCGCCG AGCGACCCGC GGAGGTGCTC GCGCTCGTCG AGGCTTTCGT GGACGGTCGT
GTGGACCCCG GGGCCGTCCC GACGGTGCAG GTATGA
 
Protein sequence
MTSSVAEPSR PTPVVLVPGF SGGGAEYAFV QPMLARRGPA VVVDLEGADP ADLAALVERV 
AGVVRAQAGP VVLVGASSGA LVATAVAAAE PRVRGLVLLG GWVAPDARLR EGLDLLLAVG
ERSPELLPAL ARLLLLSPSA TTAPGAPLLA ADPSATARLA ATRSLDVSGA AEAAPGTDAW
TTPTLVVAGS ADALVSPALT QELVGSFDDV RYAVLDAGHA LLAERPAEVL ALVEAFVDGR
VDPGAVPTVQ V