Gene Sked_13730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13730 
Symbol 
ID8633009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1546795 
End bp1547340 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003314147 
Protein GI269794692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.839534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.161793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAACCA GCAAGCGAAC GATGATCCTC GACGCGGCGA CCCGCGTCAT CCAGCGAGCA 
GGTGTCACAG CAGTGACCTT CGACTCCGTG GCGGCCGAGG CCGGCCTCAC GCGCGGAGGG
ATCATGTACC ACTTCCCCTC ACGGGAGGAG CTGCTCACCG CGCTGCACGA GCACGAGGCC
GACGCCTGGG ACGCACTGAT GGCCCGCACC GCGGGGAAGT CCGCGGACGA GGCCACCGTC
GACGAACGCC TCAGCGCCTA CGTCCGTGTC TGCACGGAGT CCGCGACCCG CGCAGAGCTC
CAGCTCCTCC TCGAGGCCGT GAGCACACCG GAGCACATGT CTCCGTGGAC GTCCGTGATG
AACCGCTGGG CACCGCCCGT CGACCCCGCC GCGGTCACCC AGGAGGACCC GGAGGCCGTC
TGGCGGCTCG TGGCACGGCT CGCCGCCGAC GGCCTCTGGA TGCACGAGGC CCTGTCCGAC
CAGCCCCTGT CACCAGAGGT CCGCGCGACC ATCGCCGAGC TCCTCGCCCG TCGAACCCCG
CTCTAG
 
Protein sequence
MRTSKRTMIL DAATRVIQRA GVTAVTFDSV AAEAGLTRGG IMYHFPSREE LLTALHEHEA 
DAWDALMART AGKSADEATV DERLSAYVRV CTESATRAEL QLLLEAVSTP EHMSPWTSVM
NRWAPPVDPA AVTQEDPEAV WRLVARLAAD GLWMHEALSD QPLSPEVRAT IAELLARRTP
L