| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_13240 |
|---|
| Symbol | |
|---|
| ID | 8632960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1487695 |
|---|
| End bp | 1488435 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | predicted membrane protein |
|---|
| Protein accession | YP_003314098 |
|---|
| Protein GI | 269794643 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACCA AGAACGAGCA CACAGCTCCC GGCACGTCCG ACGGCCGCGG CGACCACGCC
GCGACGGCGC TCGACCCCGA CCTGAGCGAC GACGACCTCA CCGACGACGA GCTCCTCGCC
GCCGAGATGG CCGCGACCTC GGTCCGCGAC AGGTCGCTCG GCGACCGCCG CTTCGGCTGG
GTCCTCGTGG TGTTCGGCCT CGTCGGCTTC GCCGCGTCGC TCGCGCTCTC GATCGAGAAG
GTCCTCAAGC TCGAGGACCC GAACCACGTC GCGAGCTGCA GCTTCAACAT CTTCCTCGAC
TGCTCGGCGG CCATGGGGTC CTGGCAGGGG AGCCTGCTGG GCTTCCCCAA CCCGTTCATC
GGGGTCGCGG CCTTCCCCGT GGTGGTCACC TCGGGCGTGG TGCTGCTCGC CGGTGCCCGG
CTCCCGGCCT GGTACTGGCG CTCGCTGCTC GGCGGCACGG TCGCGGCCCT CGGGCTCGTC
CTGTTCCTCG TGTACACCTC CGTGCACGAG CTCGAGAAGC TGTGCCCGTA CTGCATGGTC
GTCTGGTTCG CCGTGATCCC GCTGTTCTGG TACTCGTTCG TGTACGCCGT CCAGGGCCGC
ATGCTCGGCG TCTCGGACAA GGTCCGCGGC TTCGTGGTCC GCAACAGGTT CCTGCTGCTC
CTGGTCCTCT ACCTGGCCGT GACCGCCTGG GTGGTCCTCG GGATGGCCCC GGCGATCGCC
GACCACCTGC GCTACTCCTG A
|
|---|
| Protein sequence | MATKNEHTAP GTSDGRGDHA ATALDPDLSD DDLTDDELLA AEMAATSVRD RSLGDRRFGW
VLVVFGLVGF AASLALSIEK VLKLEDPNHV ASCSFNIFLD CSAAMGSWQG SLLGFPNPFI
GVAAFPVVVT SGVVLLAGAR LPAWYWRSLL GGTVAALGLV LFLVYTSVHE LEKLCPYCMV
VWFAVIPLFW YSFVYAVQGR MLGVSDKVRG FVVRNRFLLL LVLYLAVTAW VVLGMAPAIA
DHLRYS
|
|---|
| |