Gene Sked_13100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13100 
Symbol 
ID8632946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1472958 
End bp1474040 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314085 
Protein GI269794630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCTG CAGCACCCAC CGTCCGCGGC GGGGCGAGCC GCCACCCGCT CCCCGCCCCC 
CGTGGGCCGG TCAGCGAGGC GCTGCTCGCG CTCCTCGTGC TCGACCCCAC TGACGGCGCC
GACACCGGGG CCGCGAGCGA GCGGCTGCGG CAGGCCGTGG ACGCAGCTCC GTCGCTGTCC
GACCCGGAGG TCCACCTGAC CGAGGACGAC GACGTCCAGA TCACCCTGCT CTGCCTCTAC
GAGCTGCACT ACCGCGGGCT GGTGGGTGTC TCCGACACCT GGGAGTGGGA GCCAGGGCTC
CTCGCGGTCC GGGCGCGGCT CGAGTCGGTC TTCGAGGCCG AGCTCCGTCG TCGCGTGCCG
GTGCCCGGGC TGCCTGCGGC CGACCGTGCT TCCGTCGCCG AGGCGCTGTT CGCGATGACC
TCGGAGGACT CGGGCCCGGG GCTGTCGCAC TACGTGGCCC GCAAGGCGAC GGTCGAGCAG
CTCCGTGACC TCCTCGTCCA CCGGTCGCTC TACCAGCTCA AGGAGGCCGA CCCGCACACC
TGGGCGATCC CGCGGCTGGG CGGAGCGCCC AAGGGGGCGC TCGTCGAGAT CCAGACCGAC
GAGTATGGCG GGGGAGACCC GGTCGCCGCG CACGCCGCCC TGTTCGCGCA GACGATGCGC
GGCGCGGGTC TCGACGACAC CTACGGGGCC TATGTCGATG TCGTCGACGC CTCGACCCTC
GCCTCGGTGA ACATGATGTC GATGTTCGGG CTGCACCGTC GGCTCCGCGG GGCGATCGTC
GGTCACCTCG CGGCCTTCGA GATGACCTCG TCGATCCCCA ACCGGCTCTA CGGCAACGGC
TTCCGGCGGA CCGGTCACGA CGCCGAGACC ACACGGTACT TCGACGAGCA CGTCGAGGCC
GACGCGGTGC ACGAGCAGAT CGCCGGCCGT GACCTCGCCG GACGCCTCGC CGAGGACGAC
CCGGACCTGC TGGCCGACAT CATGTTCGGT GCCGCAGCCT GCCTCGCCGT CGACGGGTGG
GCCAGCGCCC GGCTCCTCGA GGCCTGGCAG CGAGGCGAGG TCGCGCTCGG GTCCGCCGCG
TGA
 
Protein sequence
MNPAAPTVRG GASRHPLPAP RGPVSEALLA LLVLDPTDGA DTGAASERLR QAVDAAPSLS 
DPEVHLTEDD DVQITLLCLY ELHYRGLVGV SDTWEWEPGL LAVRARLESV FEAELRRRVP
VPGLPAADRA SVAEALFAMT SEDSGPGLSH YVARKATVEQ LRDLLVHRSL YQLKEADPHT
WAIPRLGGAP KGALVEIQTD EYGGGDPVAA HAALFAQTMR GAGLDDTYGA YVDVVDASTL
ASVNMMSMFG LHRRLRGAIV GHLAAFEMTS SIPNRLYGNG FRRTGHDAET TRYFDEHVEA
DAVHEQIAGR DLAGRLAEDD PDLLADIMFG AAACLAVDGW ASARLLEAWQ RGEVALGSAA