Gene Sked_13090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13090 
Symbol 
ID8632945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1471035 
End bp1472765 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content71% 
IMG OID 
ProductStage II sporulation protein E (SpoIIE) 
Protein accessionYP_003314084 
Protein GI269794629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCA GAGAGCTCGC CTGGGACCAG ACGCCGCTGG GGCGACCCTC GACCTGGCAC 
CCTGCGCTGC GGCAGGCCGT GCAGCTGTGC TTCTCGACGA CCTTCCCCAT GATGATCGCC
TGGGGCCCCG AGCACACGAT GATCTACAAC GACGGCTACC GGGACATGCT CGGCACCGAC
AAGCGGCTCA ACGCGATGGG GCGGCCGTCG AAAGAGGTCT GGGCAGAGAT CTGGGACTAC
GTCGGCGGCC TGTTCGCCGA GGTCGAGGAG ACCGGGCAGT CGACCGGCGC CCTCGACCAG
CCGCTCCTCA TGAACCGGTC CGGGTTCGAG GAGGAGACCA ACTTCACCTT CTCGTACAGC
CCGATCACCG ACGAGACCGG CACCGTCCTC GGCATCCTCA ACATCACCTC GGAGACCACG
GCGTCGGTGG TCGACCGCCG CCGCCTGCAG ACCATCGACC AGCTGCACGC AGCCATGACC
GACCACCGCG CCGACATCGA CGCGCTCGCC GACGCCGTGC TGCACGTCCT GCGCGAGAGC
GCAGACATCG CCGGGGCGGA GCTCCACCTC ACCGAGGGCG GCGACCTCGT GCTCGCCGGA
CGCACCCACC ACGACCGCGG GAGCCTCGCG GCGCCGCACG TGGTGCACAA GGCATGGTCC
TCGCGGACCC CGGTGTCGTC GCGCCCCACG CTCGTCGCGC CGCTCGCACG GGCCGAGGAC
GCGATCGCCC GCGGGGTCCT GGTGCTCGAG GGAAACCCCC GACGGCCCTA CGACGCCGCC
CAGCGGTCGT TCCTCATGCT CGTGGCGTCG TCCGTCAGCG CTGCCCTGGG CGCGGCGACG
GACCTGCGGC GCGAGATCGA CCTCCTCGAC GCCCACGCCG AGCTCATCGC CCGGGACGCC
GAGCGCAGCC GCGAGTCCTC GGTGACGCTG CAGCACTCCC TGCTCACCGC CCCGCCGGAG
CCCGACCACC TGCACATCGT GGTGCGGTAC CACCCGGCCT CCGACCACCT CGAGATCGGC
GGCGACTGGT ACGACTCCTT CATGACCGAG GACGGCTCGA CGATGATCGT CATCGGCGAC
GTCACCGGCC ACGACCACCA CGCCGCCGCG GCGATGGGGC AGATCCGCGG CATCATCCGC
GCGATCGCCT ACGACCGCGG GGAGGTGCCG TCCCGGGTGC TCACCCGGGC CGACAACGCG
ATCCACGGGC TCAACCTCGG CCAGAACGCG ACCGCGAGCG CCATCGTCGC CCGCATCGAG
CAGGACCACT GCGACCTCAA GGACCGCACG CGGACCATCC GGTGGTCGAA CGCCGGGCAC
CCGCCGCCCG TGATCCTGCG GGCCGACGGC TCCGTCGAGG TGCTGCGTCG TCAGAACGAC
CTGATCCTGG GGATCATCCC GGACCACGAC CGGCACGACT TCACCATCAC GCTCAACGAC
AACGACACGC TGCTGTTCTA CACGGACGGC CTCATCGAGC GTCGCAACAG GACGATGACG
GCGAGCGTCG AGGCGCTGGT GAGCACGCTC GAGGGCCGTC AGGACGAGGA CCTCGACGGT
CTGTGCGAGC ACGTGCTGCG GACGCTCGTC CCGTCACGGG CCGAGGACGA CATCGCCCTG
GTGGTGGTGC GCGCCTACCC GCAGGACCAG CCGCGCCCGG CCGAGGCCGG CCCCAACCGG
AACATCCCGC CGGAGCTGGA CGACAGCGGG ACGGCCGACG CCGAGGAGTA G
 
Protein sequence
MAARELAWDQ TPLGRPSTWH PALRQAVQLC FSTTFPMMIA WGPEHTMIYN DGYRDMLGTD 
KRLNAMGRPS KEVWAEIWDY VGGLFAEVEE TGQSTGALDQ PLLMNRSGFE EETNFTFSYS
PITDETGTVL GILNITSETT ASVVDRRRLQ TIDQLHAAMT DHRADIDALA DAVLHVLRES
ADIAGAELHL TEGGDLVLAG RTHHDRGSLA APHVVHKAWS SRTPVSSRPT LVAPLARAED
AIARGVLVLE GNPRRPYDAA QRSFLMLVAS SVSAALGAAT DLRREIDLLD AHAELIARDA
ERSRESSVTL QHSLLTAPPE PDHLHIVVRY HPASDHLEIG GDWYDSFMTE DGSTMIVIGD
VTGHDHHAAA AMGQIRGIIR AIAYDRGEVP SRVLTRADNA IHGLNLGQNA TASAIVARIE
QDHCDLKDRT RTIRWSNAGH PPPVILRADG SVEVLRRQND LILGIIPDHD RHDFTITLND
NDTLLFYTDG LIERRNRTMT ASVEALVSTL EGRQDEDLDG LCEHVLRTLV PSRAEDDIAL
VVVRAYPQDQ PRPAEAGPNR NIPPELDDSG TADAEE