Gene Sked_12800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12800 
Symbol 
ID8632916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1445837 
End bp1446793 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content70% 
IMG OID 
Product4-hydroxybenzoate polyprenyltransferase-like prenyltransferase 
Protein accessionYP_003314056 
Protein GI269794601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.181284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC CGACGAGCAG CACCCCGCAG ACGCCCAGCG CCGCGCGCGC ATCGGCCGGG 
TCGGTCGTCG CCTCGGTGGT CGGGTCCTCT CGACCGATCA GCTGGATCAA CACGGCCTAC
CCCTTCGCCG CCGCGTACCT CATGAGCGGT GGCGGCATCA CGGCGACCTT CGTCGTCGGG
ACGCTGTACT TCCTCATCCC GTACAACCTG CTCATGTACG GGATCAACGA CGTGTTCGAC
TACGAGTCCG ACCTCCGCAA CCCGCGGAAG GGCGGCGTCG AGGGGATCGT CCTCGACCGG
CGCATGCACC GGGTGACCCT GTGGTCGGCC GTGCTGAGCA ACCTGCCGTT CCTGGTGTTC
CTGGTCGCCG TCGCGCTCGC CTGGCCGGGC CTGGGCGCGC CGGACGAGAT CAGCCCGGTC
GCCTGCCTCG TCACCCTCGC GGTGAGCGTC TTCGCGGTCG TCGCGTACTC CGCGCCCGGC
CTGCGGTTCA AGGAGCGACC GGTCCTCGAC TCGCTCACCT CCAGCACGCA CTTCGTCAGC
CCTGCTGTCG TCGGGCTGGT GTACGCGGGC TCGTCGTTCT CCGCACCCGT GGTCTTCACG
CTCGCCGCGT TCTTCCTGTG GGGCGTCGCC TCGCAGGCCT TCGGAGCCGT CCAGGACATC
GAGGCAGACC GCGAGGCGGA CATCGCCTCG ATCGGCACCG TGTTCGGCGC GTCGAGGACC
GTGCTCTTCG CGATGGCCGC CTACGCCGCG TCGGCGCTGC TGATGACCGG CGCCGGCTGG
CCGGGCGTGC TCGCAGCCGT GGTGCCCGTG CTCTACCTGG TGAACATCGC GCCGTACCGG
TCGCTGAGCG ACGCGGACTG CGAGCGGGCC AACGCGGGGT GGAAGCGGTT CCTGTGGCTC
AACATCGTCT CCGGGTTCCT CATCACCCAG TTGCTCATCT GGATCGCCCT CCGGTAG
 
Protein sequence
MSTPTSSTPQ TPSAARASAG SVVASVVGSS RPISWINTAY PFAAAYLMSG GGITATFVVG 
TLYFLIPYNL LMYGINDVFD YESDLRNPRK GGVEGIVLDR RMHRVTLWSA VLSNLPFLVF
LVAVALAWPG LGAPDEISPV ACLVTLAVSV FAVVAYSAPG LRFKERPVLD SLTSSTHFVS
PAVVGLVYAG SSFSAPVVFT LAAFFLWGVA SQAFGAVQDI EADREADIAS IGTVFGASRT
VLFAMAAYAA SALLMTGAGW PGVLAAVVPV LYLVNIAPYR SLSDADCERA NAGWKRFLWL
NIVSGFLITQ LLIWIALR