| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_12760 |
|---|
| Symbol | |
|---|
| ID | 8632912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1442667 |
|---|
| End bp | 1443560 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | phytoene/squalene synthetase |
|---|
| Protein accession | YP_003314052 |
|---|
| Protein GI | 269794597 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.28276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.614964 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCAG CCGACCACCC GTCGGACGAC CTGCACCCCG TCCCGCACGA CCCTCGCTAC
GACGCCGTCG CCCAGGCGAG CGCCGCGGTG GTCATCGACG GGTACTCCAC CTCTTTCGGC
TGGGCCTGTC GCCTGCTCCA CCGCCCGGTC CGCGGGCACG TCCGCAACAT CTACGCCCTC
GTGCGGCTGG CCGACGAGAT CGTCGACGGC CCGCTCGCCG CAGCCGACCC GACGCGCAGC
GCCCGCCTGC TCGACGACCT CGAGCGCGAG ACGTACGACG CCGTCGCGAG CGGGTACAGC
ACCAACCTCG TGGTGCACGC CTTCGCGATC ACCGCCCGAC GCTTCGACCT CGACCACGAC
CACGTCCGGG CCTTCTTCGC CTCGATGCGC ACCGACCTCA CGCGCTCGGT CCACACCGCC
GACTCCCTCG ACGAGTACAT CTACGGCTCG GCCGAGGTGG TCGGGCTCAT GTGCCTCGAC
GTGTTCCTCG GGGCGGCCGG CCGCACGGAC GTCGCAGACC TGACCCCCGG GGCCCGCAGC
CTCGGTGCGG CCTTCCAGAA GATCAACTTC CTGCGCGACC TCGGCGCCGA CCACGACGAC
CTCGGCCGCG CGTACTTCCC CGGGGTCGAC CTCGCCGCCT TCACCGACGC CGACCGCGAC
GTCCTGGTCG CCGACGTGCG CGCCGACCTG GACCGCGCGG CTACGGTGAT CCCACGGCTC
CCGGCGAACA GCCGGGTAGC CGTCGCAGCA GCCCACGGGC TCTTCGCCGA GCTCACCCGG
CGGGTCGCCG CGGTCCCGGC CGCCGAGCTG CTCACCACCC GGGTGCGGGT CCCCGCACCC
GCCAAGGCCC GGATCGTCGC GGCCGCACTG AGAAGCAGAG GGTCTTCCGT ATGA
|
|---|
| Protein sequence | MTSADHPSDD LHPVPHDPRY DAVAQASAAV VIDGYSTSFG WACRLLHRPV RGHVRNIYAL
VRLADEIVDG PLAAADPTRS ARLLDDLERE TYDAVASGYS TNLVVHAFAI TARRFDLDHD
HVRAFFASMR TDLTRSVHTA DSLDEYIYGS AEVVGLMCLD VFLGAAGRTD VADLTPGARS
LGAAFQKINF LRDLGADHDD LGRAYFPGVD LAAFTDADRD VLVADVRADL DRAATVIPRL
PANSRVAVAA AHGLFAELTR RVAAVPAAEL LTTRVRVPAP AKARIVAAAL RSRGSSV
|
|---|
| |