Gene Sked_12590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12590 
Symbol 
ID8632895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1429131 
End bp1430009 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content72% 
IMG OID 
Productflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase 
Protein accessionYP_003314035 
Protein GI269794580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.623605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG GGATCCACCT CTGGCGCTTC GACGCCGTCG AGCCGGCACG GCTGCGCGCC 
GAGCTGGCAG GGACCGCCGC CGAGGCCGAG ACCGCCGGCG TCTCGTGGGT GTCGGTGATG
GACCACTACT TCCAGATGGA GAGCGCAGGC TTCCCCGCCA GCGACCCGAT GCTCGAGGCG
TACACGACCC TCGGGTTCCT CGCCGGCCGC ACCGAGCAGG CTCAGATCGG CGCACTCGTC
ACCGGGGTGA CCTACCGTCA GCCAGGCCTG CTCGCCAAGA TCGCGACCAC CCTCGACGTG
CTGTCCGGTG GGCGCGCGAC CCTCGGCCTC GGCGCAGCCT GGTACGAGCG CGAGCACCTC
GCCCTCGGCG TCCCGTACCC GCCCCTCGCC GAACGGTTCG AGCGCCTCGA GGAGACGCTG
CAGATCTGCC ACCAGATGTG GGACCCGACC GACGACGGCC CCTTCGACGG GACGCACTAC
CAGCTCGCCG AGACGCTCTG CTCGCCGCAG CCCCTCAGCG CCCCGCACCC CGAGGTGATG
GTCGGCGGCG GGGGAGAGCG CAAGACACTG CGGCTCGTGG CGCAGTACGC CGACGCCTGC
AACCTCTTCG CGACCACCCC GGAGCAGGTG TCCCACAAGA TCGACGTGCT CCGCCGGCAC
TGCGACGACC TCGGCCGCGA CCCCGCCGAG ATCCGCGTGA CCATGATGCA CGGCGGCGAG
GAGCTCCACG CGGGCGACCC GGCCGCCTTC GCCGAGACGC TGCGACCCTA CGCAGCCCTC
GGCGTCGAGA CCGTAATCGT CGCCACGCCC TCGACCAGCG GCCCCGAGTG GGTCCGCGAC
CGGGTCGCCC CGGCCGTCCC GCTGCTGAGA GACCTCTGA
 
Protein sequence
MRLGIHLWRF DAVEPARLRA ELAGTAAEAE TAGVSWVSVM DHYFQMESAG FPASDPMLEA 
YTTLGFLAGR TEQAQIGALV TGVTYRQPGL LAKIATTLDV LSGGRATLGL GAAWYEREHL
ALGVPYPPLA ERFERLEETL QICHQMWDPT DDGPFDGTHY QLAETLCSPQ PLSAPHPEVM
VGGGGERKTL RLVAQYADAC NLFATTPEQV SHKIDVLRRH CDDLGRDPAE IRVTMMHGGE
ELHAGDPAAF AETLRPYAAL GVETVIVATP STSGPEWVRD RVAPAVPLLR DL