Gene Sked_12190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12190 
Symbol 
ID8632855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1397719 
End bp1399269 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content76% 
IMG OID 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain 
Protein accessionYP_003313995 
Protein GI269794540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TCGAGATCCG CGGGCTCGAC GTGTCGTTCC CCGGCGTCGG GAGCGTGCTG 
CGCGGCGTCG ACCTCTCCGT CGCGCCCGGC GAGTGCGTCG CCGTCGTCGG GGAGTCGGGG
TCGGGCAAGT CCGTCCTGGT CCGCTCGGTG CTCGGCCTCG CCTCGGAAGG CGGGTCGACC
GCGACGGTCA CGGCCGCGAC CTTCACCGTC GCCGGCCGAG ACGTCCGCCG CCTCTCGGAG
CGCGGGTGGC GGTCGGTGCG CGGCTCCCAG GTGGGCCTCG TGCTCCAGGA CGCCCTGCAG
TCCCTCGACC CCCTGCGGAC CGTCGGCGCC GAGATCGGCG AGACGCTCGC CCTGCGCAAG
CTGCCGCGCG CCCAGCGCCG CGAGCGGACG CTGCGTGCAC TCGCCGCAGC CGGGCTCGAC
TCCCCCGAGC TGCGTTTCGC GCAGCGGCCT GGCCAGCTGT CCGGCGGCAT GCGCCAGCGC
GCGCTCATCG CCTCCGCCCT CGTCGCCGAG CCACCGCTCC TGGTGCTCGA CGAACCGACG
ACCGCGCTCG ACGCGACCGT CGCCGCACGC GTGCTCGACA CCCTCGCCGA GCTTCGCGAC
TCCGGGACCG CGCTGCTGCT GGTGAGCCAC GACCTGGCCG CCGTCGCGCA GGTCGCCGAC
CGTGTCGTCG TGCTGAGCCA CGGCGAGGTC GTCGAGGAGG GGCCCACGGC GCAGGTGCTG
TCCTCGCCGC AGCACCCGGA GACCCAGCGG CTCGCGGCCG CCGTCCCCCG CGGTGCCAAG
CCCGGAACCG CGCCCGACAT CGGACCGGTG GTCCTGTCCG GTCGCGGCCT GTCGCGGACG
TTCTCGACGC CTGGCGGTGG CCACGTGCGC GCCGTGGACG GCGTCGACGT CGAGCTCCAC
CGTGGCGAGG CCCTCGGGAT CGTCGGCGAG TCCGGGTCGG GCAAGACGAC CCTCGCCCGG
CTGCTGCTCG CGGCCGAGGC GCCCGACGCC GGGGTGGTGA CCCTCGACGG TGAGCCGTGG
AGCGCCGCCG GGCACCGCGA GCGCCAGTCC CGCCGGCACC GCGTCCAGCT GGTCCCGCAA
GACCCGCTCG GGTCCTTCGA CCCCCGGTAC ACCGCAGGGC GCATCCTCCG TGAGGCGCTC
TCCCGCGGGC GGTCGACCGC GACGCCGGTC GAGCTGCTCG AGGCGGTGCG CCTCCCGCCC
GAGGTGCTCG GGCGTCGTCC ACGCAGCCTC TCCGGAGGCC AGCGTCAGCG TCTCGCCATC
GCCCGGGCGC TCGCCCTCGA GCCCGACGTC CTGGTCTGCG ACGAGCCGGT GTCGGCGCTC
GACGTCACCG TGCAGGCGGA GATCCTCGAC CTGGTGCTGG ACCTCCAGCG CAGCCGCGGG
CTGTCGATCG TCTTCGTGTC GCACGACCTC GCGGTGGTCC GGCAGGTCTG CGACACGGTG
CTCGTGATGC GCGACGGCAA GGTCGTCGAG CACGGCCCGG TCGAGGAGGT CTTCGCGCGA
CCGCAAGACC CGTTCACCCG GGAGCTGCTG GGGGCGCGAC GCGGGGCGTG A
 
Protein sequence
MSALEIRGLD VSFPGVGSVL RGVDLSVAPG ECVAVVGESG SGKSVLVRSV LGLASEGGST 
ATVTAATFTV AGRDVRRLSE RGWRSVRGSQ VGLVLQDALQ SLDPLRTVGA EIGETLALRK
LPRAQRRERT LRALAAAGLD SPELRFAQRP GQLSGGMRQR ALIASALVAE PPLLVLDEPT
TALDATVAAR VLDTLAELRD SGTALLLVSH DLAAVAQVAD RVVVLSHGEV VEEGPTAQVL
SSPQHPETQR LAAAVPRGAK PGTAPDIGPV VLSGRGLSRT FSTPGGGHVR AVDGVDVELH
RGEALGIVGE SGSGKTTLAR LLLAAEAPDA GVVTLDGEPW SAAGHRERQS RRHRVQLVPQ
DPLGSFDPRY TAGRILREAL SRGRSTATPV ELLEAVRLPP EVLGRRPRSL SGGQRQRLAI
ARALALEPDV LVCDEPVSAL DVTVQAEILD LVLDLQRSRG LSIVFVSHDL AVVRQVCDTV
LVMRDGKVVE HGPVEEVFAR PQDPFTRELL GARRGA