Gene Sked_12170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12170 
Symbol 
ID8632853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1396299 
End bp1397087 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003313993 
Protein GI269794538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCTC TCAGAGGTCC GATCGCTCCC CGCCCCGGAG TCCCGCTGCG GGTCGAGGTC 
TACGACCGCA TCGCGAGCGC CGTCCGCACC GGCGCCCTGC CGCCGGAGTC GTTGCTCCCC
AGCGAGAGCG AGATCGGCGA GGCGATGGAG GTCAGCCGCA CCGTCGTCCG AGAGGCGCTG
CTGCTGCTCG AGGAGGACGG GCTGCTCCGG TCACGCCGGG GGATCGGCCG TGTCGTCTGC
GCCGCCCAGC CACCCGCAGG TTTCGAGCGG CTGCGCCCGA TGGAGCAGGT CCTCTCCGAC
CGGTTCCCCG ACCTGTCGCT CAGCCGCACC GAGGTGACGC TGCAGCACGA GTCGGCGTCG
TTCATCGCCG AGGGCCTCGG CATCGCACCG ACGTCGCCGA GCCTGTTCGT CGAGTCCCTG
CTGTCCAGCG ACGGCGAACC CGTCGCGCTG GTCCAGGAGC ACCTCCCGGC GGGGGAGCGC
CTCCATACCT TCGGCGCGCA GGTGCAGCGC CTCGTCGAAG ACCTCGACCC CGACCGCACA
TGCCTCGGTG TCCTGACGGC TGACCTCGGG CCAGCCCTCG GCAGCGGGCG GTCGGAGCTG
ACGGCCGGCA CGCCGGGGGC TGTCCGCGCG AAGCTGCTCG CCGTCCGCCC CACCTCGCCC
GTGCTGATCG TCACGCAGAC GGTCCACCTC GGCGCCCGGC CGCTCTACCT GGCCAAGGTG
GTCCTCCGCC CCGAGGCGGG ACCGCTCGAG ATCAGCCACC CCGCGGGACG AGGGCACCTG
CCCGCCTGA
 
Protein sequence
MTALRGPIAP RPGVPLRVEV YDRIASAVRT GALPPESLLP SESEIGEAME VSRTVVREAL 
LLLEEDGLLR SRRGIGRVVC AAQPPAGFER LRPMEQVLSD RFPDLSLSRT EVTLQHESAS
FIAEGLGIAP TSPSLFVESL LSSDGEPVAL VQEHLPAGER LHTFGAQVQR LVEDLDPDRT
CLGVLTADLG PALGSGRSEL TAGTPGAVRA KLLAVRPTSP VLIVTQTVHL GARPLYLAKV
VLRPEAGPLE ISHPAGRGHL PA