Gene Sked_12090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12090 
Symbol 
ID8632845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1391408 
End bp1391956 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003313985 
Protein GI269794530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCC AGAGAACTCG CGACACGGTC CACCGGGCAG TCCTGTCGCT CGCGGGCGAG 
GGGCGCGTCG GTGCGATCAC CATGGAGGGC ATCGCCGCTC GCGCCGGTGT CAGCAAGCAG
ACGCTCTACC GGTCGTGGGC CTCGACCGGG GCGATCCTCT TCGACGCGCT GCTCGCGCGC
AGTCTCGACG ACGACGGCAG CGTCGTCCTG CCCGACTCGG GAGACCTCGC GCACGACCTC
GAGGAGCTCG CGACAGGGAT GGTCGCAGAG CTCTCCGACC CGACCCACGG CCCGCTGCTG
CGGGCGGTGA CAGCGGAGAT GCAGTCCGAC GACGCGCTCG CGGAGGAGTT CCGCAGGCTG
CTCCTCGGTC CGCAGATGAA GGCCGTCTCG GACCGCCTGC GTCGAGGTGG TGTCGCTGAA
GCAGACGATG TCGCCGAGCT GTTCGTCGGG CCGGTGCTTC ATCGATGGCT GCTCCGCAGC
CGCCCGTTCG ACACGGGCTG GGTGTCGGCA CACGTCGCCC GGACGATGCG AGCTGCGGGT
GTCGTCTGA
 
Protein sequence
MARQRTRDTV HRAVLSLAGE GRVGAITMEG IAARAGVSKQ TLYRSWASTG AILFDALLAR 
SLDDDGSVVL PDSGDLAHDL EELATGMVAE LSDPTHGPLL RAVTAEMQSD DALAEEFRRL
LLGPQMKAVS DRLRRGGVAE ADDVAELFVG PVLHRWLLRS RPFDTGWVSA HVARTMRAAG
VV