Gene Sked_11940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11940 
Symbol 
ID8632830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1380149 
End bp1380691 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003313971 
Protein GI269794516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.11697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG AGAAGGCAGA GCGGGCCGAC ACCACCGGCG ACGGCGGTCC CGTGCCCTGG 
CTGGCCCCGG ACGAGGTCCG TGCCTGGCTC CTGCTCTCGG CGCTCATGGA GGCCCTGCCT
CCCGCGATCA GCAGCGGGCT CAAGCGCGAG AGCGGCGTCA ACGGCTTCGA CTACATGGTC
ATGGCCGGCT TGTCCGAGGC CCCGGGACGG GCAGCGCTGA TGAGCGACCT CGCGGCCTTC
GTCGCGGGGT CGATCTCCCG TCTGTCGCAC GCGCTGACCC GCATGGAGGA CCGCGGGTGG
GTGGAGCGAC GACCGTTCGC CGGCGACGGC CGCCAGACCG AGGTGGTGCT CACCGACGCC
GGGACGGCGC TCGTGGTCGC AGCAGCGCCC GGCCACGTGC GGACCGTCCG CGAGCTGGTC
GTCGACCCCC TCGGGCCCGA GAAGATGGTG CAGCTCGGCG ACCTCGTCGC ACAGGTGCTC
GAGGTCGTGA ACCCCGAGAT CCTCCGTGTG CTCGCGACGA CCTACCCGCA CGACGGATCC
TGA
 
Protein sequence
MDDEKAERAD TTGDGGPVPW LAPDEVRAWL LLSALMEALP PAISSGLKRE SGVNGFDYMV 
MAGLSEAPGR AALMSDLAAF VAGSISRLSH ALTRMEDRGW VERRPFAGDG RQTEVVLTDA
GTALVVAAAP GHVRTVRELV VDPLGPEKMV QLGDLVAQVL EVVNPEILRV LATTYPHDGS