Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_11940 |
Symbol | |
ID | 8632830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1380149 |
End bp | 1380691 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_003313971 |
Protein GI | 269794516 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.11697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACG AGAAGGCAGA GCGGGCCGAC ACCACCGGCG ACGGCGGTCC CGTGCCCTGG CTGGCCCCGG ACGAGGTCCG TGCCTGGCTC CTGCTCTCGG CGCTCATGGA GGCCCTGCCT CCCGCGATCA GCAGCGGGCT CAAGCGCGAG AGCGGCGTCA ACGGCTTCGA CTACATGGTC ATGGCCGGCT TGTCCGAGGC CCCGGGACGG GCAGCGCTGA TGAGCGACCT CGCGGCCTTC GTCGCGGGGT CGATCTCCCG TCTGTCGCAC GCGCTGACCC GCATGGAGGA CCGCGGGTGG GTGGAGCGAC GACCGTTCGC CGGCGACGGC CGCCAGACCG AGGTGGTGCT CACCGACGCC GGGACGGCGC TCGTGGTCGC AGCAGCGCCC GGCCACGTGC GGACCGTCCG CGAGCTGGTC GTCGACCCCC TCGGGCCCGA GAAGATGGTG CAGCTCGGCG ACCTCGTCGC ACAGGTGCTC GAGGTCGTGA ACCCCGAGAT CCTCCGTGTG CTCGCGACGA CCTACCCGCA CGACGGATCC TGA
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Protein sequence | MDDEKAERAD TTGDGGPVPW LAPDEVRAWL LLSALMEALP PAISSGLKRE SGVNGFDYMV MAGLSEAPGR AALMSDLAAF VAGSISRLSH ALTRMEDRGW VERRPFAGDG RQTEVVLTDA GTALVVAAAP GHVRTVRELV VDPLGPEKMV QLGDLVAQVL EVVNPEILRV LATTYPHDGS
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